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Commits on Apr 2, 2019

• Fixed bug in allc-to-bigwig

  yupenghe

  committed
  7a7e0e5

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Commits on Mar 29, 2019

• Updated version

  yupenghe

  committed
  47e8cf1

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• fixed bug for allc-to-bigwig

  yupenghe

  committed
  ab41531

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Commits on Mar 28, 2019

• Updated version

  yupenghe

  committed
  b04bdeb

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• Fixed bug

  yupenghe

  committed
  f229e7c

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• Fixed bug

  yupenghe

  authored
  ad88d75

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Commits on Mar 25, 2019

• Merge pull request #27 from lhqing/methylpy

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  yupenghe

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  d246ac6

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• change back to gzip.open

  lhqing

  authored
  4e121be

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• Updated version

  yupenghe

  committed
  6d62555

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• Merge pull request #26 from lhqing/methylpy

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  yupenghe

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  1d2d716

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• Merge branch 'methylpy' of https://github.com/lhqing/methylpy into methylpy

  lhqing

  committed
  a773ee1

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• modify open_allc_file

  lhqing

  committed
  968f495

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• Update utilities.py

  Show description for 59e3b18
  yupenghe

  authored
  59e3b18

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• Merge branch 'methylpy' into methylpy

  yupenghe

  authored
  1ac3470

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• Update utilities.py

  lhqing

  committed
  b348db8

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Commits on Mar 24, 2019

• fix index_allc_file

  lhqing

  committed
  4f634ee

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Commits on Jul 4, 2018

• fix bug on index allc

  yupenghe

  committed
  2ca35f5

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Commits on May 16, 2018

• Change the default of --add-chr-prefix to True

  yupenghe

  committed
  cc031a7

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• Add new function to perform binomial test on already-generated allc file

  yupenghe

  committed
  22e309e

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Commits on Apr 18, 2018

• fix bug in add-methylation-level

  yupenghe

  committed
  a545a73

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Commits on Mar 13, 2018

• Correct documentation and menual

  yupenghe

  committed
  73fda3c

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Commits on Feb 16, 2018

• fix bugs on add-methylation-level function

  yupenghe

  committed
  9a1a52e

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Commits on Jan 29, 2018

• change indexing setting

  yupenghe

  committed
  cce3d4a

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• fix bug on checking index file completeness

  yupenghe

  committed
  ffebcc5

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Commits on Jan 26, 2018

• add buffer to I/O of converted read step

  yupenghe

  committed
  fe47cbc

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• remove changes

  yupenghe

  committed
  67a66f3

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• add checking for the completeness of allc index file

  yupenghe

  committed
  f08e29a

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• implement feature to generate bgzip compressed allc files and create tabix index for them; support minimap2

  yupenghe

  committed
  b408bae

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Commits on Jan 18, 2018

• add maximum and minimum coverage filter to various function

  yupenghe

  committed
  4a42bd0

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Commits on Jan 16, 2018

• update README; remove test data in the package

  yupenghe

  committed
  749f36f

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Commits on Jan 11, 2018

• update version

  yupenghe

  committed
  db6a6da

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• Fix bug

  yupenghe

  committed
  40da53a

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• fix compatibility issue with python3

  yupenghe

  committed
  3c393cc

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• fix a bug on merge-allc when too many files are open

  yupenghe

  committed
  c8984d2

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Commits on Jan 4, 2018

• Fix issue in utilities.get_executable_version when python3 is used

  yupenghe

  committed
  c508311

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