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Commits on Apr 25, 2019

• replace T/F with TRUE/FALSE for BiocCheck

  schifferl

  committed
  9c5f2bf

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Commits on Sep 6, 2018

• additional updates from BiocInstaller to BiocManager

  LiNk-NY

  committed
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Commits on Jun 6, 2018

• Fix # sample, don't encourage installing from github

  lwaldron

  committed
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Commits on Apr 26, 2018

• vignette changes to reflect that combined_metadata is a DataFrame

  schifferl

  committed
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Commits on Oct 24, 2017

• Clustering figure changed for revisions 9-24-17

  audreyrenson

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Commits on Aug 31, 2017

• Add boxplot of all read depths to vignette.

  lwaldron

  committed
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Commits on Aug 2, 2017

• Make sure user has bioc-devel

  edoardopasolli

  authored
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Commits on Aug 1, 2017

• Make sure user has bioc-devel in vignettes/extras/PaperFigures.Rmd

  lwaldron

  committed
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Commits on Jul 20, 2017

• copy edit to vignette

  lwaldron

  committed
  3cc4e7a

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• Fix vignette error

  lwaldron

  committed
  6cb0bb1

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• Update NEWS, finish sentence in vignette, revert version to 1.7.2 b/c hasn't gone to bioc-devel yet and makes more sense in NEWS.

  lwaldron

  committed
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• get rid of ExpressionSet2phyloseq(., relab=FALSE) advice. Clean up single dataset download advice.

  lwaldron

  committed
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• Add a vignette section on phylogenetic trees + UniFrac distances

  lwaldron

  committed
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Commits on Jul 3, 2017

• Remove all syntax checking features, these are now at https://github.com/waldronlab/curatedMetagenomicDataCuration.

  lwaldron

  committed
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Commits on Jul 2, 2017

• fixed typo in the text

  edoardopasolli

  authored
  7738579

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• Added section to vignette on merging datasets.

  lwaldron

  committed
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• Added inst/NEWS.md

  lwaldron

  committed
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Commits on Jun 30, 2017

• bump version and add BiocStyle in vignette

  schifferl

  committed
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Commits on Jun 29, 2017

• More vignette improvements

  lwaldron

  committed
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Commits on Jun 27, 2017

• minor changes to text

  edoardopasolli

  authored
  866bd4c

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• minor change to the text

  edoardopasolli

  authored
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Commits on Jun 26, 2017

• fixed text style

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  edoardopasolli

  authored
  3c1d4e3

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Commits on Jun 20, 2017

• updated "setup" section

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  edoardopasolli

  authored
  01e2016

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• fixed text in "setup" section

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  edoardopasolli

  authored
  320dd8e

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• updated "setup" section

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  edoardopasolli

  authored
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Commits on Jun 16, 2017

• updated sessionInfo()

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  edoardopasolli

  authored
  b023a99

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• figures centered

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  edoardopasolli

  authored
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• updated figure sizes

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  edoardopasolli

  authored
  976e871

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• updated paper figures

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  edoardopasolli

  authored
  73c01d2

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Commits on Jun 15, 2017

• text fixed

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  edoardopasolli

  authored
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• text fixed

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  edoardopasolli

  authored
  368567c

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• code to reproduce paper figures updated

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  edoardopasolli

  authored
  4015da7

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• code to reproduce paper figures updated

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  edoardopasolli

  authored
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Commits on Jun 14, 2017

• correction to primary vignette errors

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  schifferl

  committed
  dccd444

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Commits on Jun 7, 2017

• added warning for supplemental figure 5

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  edoardopasolli

  authored
  6fc007e

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