Skip to content

Latest commit

 

History

History

idba

Folders and files

NameName
Last commit message
Last commit date

parent directory

..
README
README
 
 
bit_edges.h
bit_edges.h
 
 
bit_operation.h
bit_operation.h
 
 
contig_builder.h
contig_builder.h
 
 
contig_graph.cpp
contig_graph.cpp
 
 
contig_graph.h
contig_graph.h
 
 
contig_graph_branch_group.cpp
contig_graph_branch_group.cpp
 
 
contig_graph_branch_group.h
contig_graph_branch_group.h
 
 
contig_graph_path.h
contig_graph_path.h
 
 
contig_graph_vertex.h
contig_graph_vertex.h
 
 
contig_info.h
contig_info.h
 
 
functional.h
functional.h
 
 
hash.h
hash.h
 
 
hash_graph.cpp
hash_graph.cpp
 
 
hash_graph.h
hash_graph.h
 
 
hash_graph_path.h
hash_graph_path.h
 
 
hash_graph_vertex.h
hash_graph_vertex.h
 
 
hash_table.h
hash_table.h
 
 
kmer.h
kmer.h
 
 
pool.h
pool.h
 
 
sequence.cpp
sequence.cpp
 
 
sequence.h
sequence.h
 
 
vertex_status.h
vertex_status.h
 
 

README

Files in this directory are integrated from IDBA package (https://github.com/loneknightpy/idba).
The files are amended to be single-threaded.

Lisence：

Copyright (C) 2009 Yu Peng (loneknightpy@gmail.com)
Copyright (C) 2015 Dinghua Li (voutcn@gmail.com)

This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version.

This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.

You should have received a copy of the GNU General Public License along with this program; if not, write to the Free Software Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA.