simplified cellranger for long-read data

Course Assignment on Clustering of Spatial Transcriptomics Data

The Advanced Genome Browser

Research into the viability of leveraging deep learning to successfully generate synthetic biological samples and identify predictive genetic variants.

Computational Genomics with R のサンプル集です

🏥 This is my attempt at the selection tests for the GSOC 2019 project, "Human history and data visualization" under the Canadian Center for Computational Genomics

Homepage of Dr Stephen P. Moss, Computational Scientist

This repository contains all the materials for the final project of "Introduction to Bioinformatics", conducted in the fall of 2023 at Sharif University of Technology. The project explores the evolution of flight in birds, covering a wide range of Bioinformatics tasks like Gene Expression Analysis, Genome Assembly, Sequencing and Alignment.

Biplots, Volcano plots, PCA plots, Heatmaps and more Computational Genomics data created and visualized during University of Pittsburgh course, Computational Biology (BIOSC1540), with Dr. Miler Lee

This project focuses on analyzing gene expression data from TCGA cancer data to derive associations among genes as well as disease phenotypes, co-expression signatures, and survival analysis.

Independent project I undertook to perform a full ChIP-Seq analysis of the transcription factor Nanog in Zebrafish embryos.

Computational Genomics with R

Bioinformatics wealth of African countries

This repository contains a Bayesian Neural Network (BNN) based analysis tool for biological network inference that can be used with various datasets. It is programmed in Python along with the torch, torchbnn, pandas, scikit-learn, and matplotlib libraries.

Workshops, Course Schedule and Teaching Assistant Review from my time as a chosen Undergraduate Teaching Assistant for the University of Pittsburgh course, BIOSC1540 - Computational Genomics taught by Dr. Miler Lee.

Project for the course Computational Genomics

This repo includes assignments of the course Computational genomics and proteomics.

Kuan-Hao Chao's Website