Skip to content
@monarch-initiative

Monarch Initiative

Cross-species disease discovery and diagnosis

Pinned Loading

  1. mondo mondo Public template

    Mondo Disease Ontology

    Jupyter Notebook 237 54

  2. koza koza Public

    Data transformation framework for LinkML data models

    Python 49 4

  3. MAxO MAxO Public

    Medical action ontology

    HTML 52 4

  4. helpdesk helpdesk Public

    The Monarch Initiative Helpdesk

    7

  5. monarch-ingest monarch-ingest Public

    Data ingest application for Monarch Initiative knowledge graph using Koza

    Python 15 2

  6. monarch-app monarch-app Public

    Monarch Initiative website and API

    Python 19 6

Repositories

Showing 10 of 239 repositories
  • monarch-mapping-commons Public

    Building a fully exectuable workflow for boomer

    monarch-initiative/monarch-mapping-commons’s past year of commit activity
    Python 4 CC0-1.0 3 13 2 Updated Dec 28, 2024
  • omim Public

    Data ingest pipeline for OMIM.

    monarch-initiative/omim’s past year of commit activity
    Jupyter Notebook 7 3 62 2 Updated Dec 27, 2024
  • mondo-ingest Public

    Coordinating the mondo-ingest with external sources

    monarch-initiative/mondo-ingest’s past year of commit activity
    Jupyter Notebook 6 3 231 (1 issue needs help) 21 Updated Dec 27, 2024
  • phenopacket-store Public

    Collections of GA4GH phenopackets that represent individuals with Mendelian diseases.

    monarch-initiative/phenopacket-store’s past year of commit activity
    Jupyter Notebook 17 BSD-3-Clause 4 14 0 Updated Dec 27, 2024
  • monarch-documentation Public

    Technical documentation for all Monarch applications, packages, services and related projects.

    monarch-initiative/monarch-documentation’s past year of commit activity
    Python 6 GPL-3.0 0 19 2 Updated Dec 26, 2024
  • monarchr Public

    R package for easy access, manipulation, and analysis of the Monarch Initiative or other KGX-formatted knowledge graphs.

    monarch-initiative/monarchr’s past year of commit activity
    R 11 1 19 (2 issues need help) 0 Updated Dec 26, 2024
  • zfin-genotype-to-phenotype-ingest Public
    monarch-initiative/zfin-genotype-to-phenotype-ingest’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Dec 25, 2024
  • mondo Public template

    Mondo Disease Ontology

    monarch-initiative/mondo’s past year of commit activity
    Jupyter Notebook 237 CC-BY-4.0 54 407 (2 issues need help) 37 Updated Dec 23, 2024
  • hpotools Public

    Human Phenotype Ontology tools

    monarch-initiative/hpotools’s past year of commit activity
    Java 1 MIT 0 1 0 Updated Dec 23, 2024
  • MAxO Public

    Medical action ontology

    monarch-initiative/MAxO’s past year of commit activity
    HTML 52 CC-BY-4.0 4 4 0 Updated Dec 23, 2024
View all repositories