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不能指定范围作图 #9

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shaoxiong2588 opened this issue Jan 18, 2024 · 3 comments
Open

不能指定范围作图 #9

shaoxiong2588 opened this issue Jan 18, 2024 · 3 comments

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@shaoxiong2588
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coding gene

trancriptVis(gtfFile = gtf1,
Chr = 17,
posStart = 36783355,
posEnd = 36783400)
Error in map():
ℹ In index: 1.
Caused by error in dplyr::filter():
ℹ In argument: gene_id == gid[x].
Caused by error:
! object 'gene_id' not found
Run rlang::last_trace() to see where the error occurred.
Warning message:
Unknown or uninitialised column: gene_id.

I am encountering an issue with the trancriptVis function. The error suggests that it cannot find the 'gene_id' column, even though the column does exist in my data. I have checked the data structure, case sensitivity, and library loading. How can I resolve this issue? Running rlang::last_trace() did not provide additional insights. Any help would be appreciated.

@binzhengbin
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同问

@binzhengbin
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trancriptVis(gtfFile = gtf,

  •         Chr = 'chr2',
    
  •         posStart = 1427100000,
    
  •         posEnd = 1427600000) 
    

Error in map():
ℹ In index: 1.
Caused by error in dplyr::filter():
ℹ In argument: gene_id == gid[x].
Caused by error:
! 找不到对象'gene_id'
Run rlang::last_trace() to see where the error occurred.
Warning message:
Unknown or uninitialised column: gene_id.

@junjunlab
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Owner

数据代码发我看看

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3 participants