Debugging of batch scripts.

fdbesanto2 · Mar 23, 2019 · 29cbd04 · 29cbd04
1 parent 09d85ea
commit 29cbd04
Show file tree

Hide file tree

Showing 2 changed files with 3 additions and 2 deletions.
diff --git a/batchBiomass.bash b/batchBiomass.bash
@@ -55,7 +55,7 @@ fi
 temp="/tmp/workSpace.biomass.$$.txt"
 while read inName; do
 
-  python3 $bin/predictBiomass.py --input $inName --outpout $temp
+  python3 $bin/predictBiomass.py --input $inName --output $temp
   cat $temp >> $output
 
   if [ -e $temp ];then
@@ -66,4 +66,5 @@ done  < $list
 if [ -e $list ];then
   rm $list
 fi
+echo "Written to $output"
 
diff --git a/batchProcess.bash b/batchProcess.bash
@@ -113,7 +113,7 @@ fi
 while read inName; do
   root=`echo $inName|gawk -F/ '{print $NF}'`
   output="$outRoot.$root"
-  gediMetric -input $inName -readHDFgedi $bounds -ground $varScale $statsLen $noiseTrack $sWidth $psWidth $msWidth $gWidth $minGsig $minWidth -outRoot $output -varNoise
+  gediMetric -input $inName -readHDFgedi $bounds -ground $varScale $statsLen $noiseTrack $sWidth $psWidth $msWidth $gWidth $minGsig $minWidth -outRoot $output -varNoise -rhRes 5
 done  < $list
 
 if [ -e $list ];then