release bump

berkeleybop · Jun 10, 2015 · 660723e · 660723e
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diff --git a/docs/files/minerva/manager-js.html b/docs/files/minerva/manager-js.html
diff --git a/docs/files/noctua/edit-js.html b/docs/files/noctua/edit-js.html
diff --git a/docs/index/Classes.html b/docs/index/Classes.html
@@ -11,19 +11,23 @@
 
 
 
-<div id=Index><div class=IPageTitle>Class Index</div><div class=INavigationBar>$#! &middot; 0-9 &middot; A &middot; <a href="#B">B</a> &middot; <a href="#C">C</a> &middot; <a href="#D">D</a> &middot; E &middot; F &middot; G &middot; H &middot; I &middot; J &middot; K &middot; <a href="#L">L</a> &middot; <a href="#M">M</a> &middot; N &middot; O &middot; P &middot; Q &middot; <a href="#R">R</a> &middot; S &middot; T &middot; U &middot; <a href="#V">V</a> &middot; <a href="#W">W</a> &middot; X &middot; Y &middot; Z</div><table border=0 cellspacing=0 cellpadding=0><tr><td class=IHeading id=IFirstHeading><a name="B"></a>B</td><td></td></tr><tr><td class=ISymbolPrefix id=IFirstSymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/barista/client-js.html#bbopx.barista.client" id=link1 onMouseOver="ShowTip(event, 'tt1', 'link1')" onMouseOut="HideTip('tt1')" class=ISymbol>bbopx.<wbr>barista.<wbr>client</a></td></tr><tr><td class=ISymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/barista/response-js.html#bbopx.barista.response" id=link2 onMouseOver="ShowTip(event, 'tt2', 'link2')" onMouseOut="HideTip('tt2')" class=ISymbol>bbopx.<wbr>barista.<wbr>response</a></td></tr><tr><td class=ISymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/minerva/manager-js.html#bbopx.minerva.manager" id=link3 onMouseOver="ShowTip(event, 'tt3', 'link3')" onMouseOut="HideTip('tt3')" class=ISymbol>bbopx.<wbr>minerva.<wbr>manager</a></td></tr><tr><td class=ISymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/minerva/requests-js.html#bbopx.minerva.request" id=link4 onMouseOver="ShowTip(event, 'tt4', 'link4')" onMouseOut="HideTip('tt4')" class=ISymbol>bbopx.<wbr>minerva.<wbr>request</a></td></tr><tr><td class=ISymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/minerva/requests-js.html#bbopx.minerva.request_set" id=link5 onMouseOver="ShowTip(event, 'tt5', 'link5')" onMouseOut="HideTip('tt5')" class=ISymbol>bbopx.<wbr>minerva.<wbr>request_set</a></td></tr><tr><td class=ISymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/minerva/requests-js.html#bbopx.minerva.request_variable" id=link6 onMouseOver="ShowTip(event, 'tt6', 'link6')" onMouseOut="HideTip('tt6')" class=ISymbol>bbopx.<wbr>minerva.<wbr>request_variable</a></td></tr><tr><td class=ISymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/noctua/draggable-canvas-js.html#bbopx.noctua.draggable_canvas" id=link7 onMouseOver="ShowTip(event, 'tt7', 'link7')" onMouseOut="HideTip('tt7')" class=ISymbol>bbopx.<wbr>noctua.<wbr>draggable_canvas</a></td></tr><tr><td class=ISymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/noctua/location-store-js.html#bbopx.noctua.location-store" id=link8 onMouseOver="ShowTip(event, 'tt8', 'link8')" onMouseOut="HideTip('tt8')" class=ISymbol>bbopx.<wbr>noctua.<wbr>location-store</a></td></tr><tr><td class=ISymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/noctua/widgets-js.html#bbopx.noctua.widgets" id=link9 onMouseOver="ShowTip(event, 'tt9', 'link9')" onMouseOut="HideTip('tt9')" class=ISymbol>bbopx.<wbr>noctua.<wbr>widgets</a></td></tr><tr><td class=ISymbolPrefix id=ILastSymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/version-js.html#bbopx.version" id=link10 onMouseOver="ShowTip(event, 'tt10', 'link10')" onMouseOut="HideTip('tt10')" class=ISymbol>bbopx.<wbr>version</a></td></tr><tr><td class=IHeading><a name="C"></a>C</td><td></td></tr><tr><td class=ISymbolPrefix id=IFirstSymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/barista/client-js.html#client.js"  class=ISymbol>client.js</a></td></tr><tr><td class=ISymbolPrefix id=ILastSymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/noctua/context-js.html#context.js" id=link11 onMouseOver="ShowTip(event, 'tt11', 'link11')" onMouseOut="HideTip('tt11')" class=ISymbol>context.js</a></td></tr><tr><td class=IHeading><a name="D"></a>D</td><td></td></tr><tr><td class=ISymbolPrefix id=IOnlySymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/noctua/draggable-canvas-js.html#draggable-canvas.js"  class=ISymbol>draggable-canvas.js</a></td></tr><tr><td class=IHeading><a name="L"></a>L</td><td></td></tr><tr><td class=ISymbolPrefix id=IOnlySymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/noctua/location-store-js.html#location-store.js"  class=ISymbol>location-store.js</a></td></tr><tr><td class=IHeading><a name="M"></a>M</td><td></td></tr><tr><td class=ISymbolPrefix id=IOnlySymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/minerva/manager-js.html#manager.js"  class=ISymbol>manager.js</a></td></tr><tr><td class=IHeading><a name="R"></a>R</td><td></td></tr><tr><td class=ISymbolPrefix id=IFirstSymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/minerva/requests-js.html#requests.js"  class=ISymbol>requests.js</a></td></tr><tr><td class=ISymbolPrefix id=ILastSymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/barista/response-js.html#response.js"  class=ISymbol>response.js</a></td></tr><tr><td class=IHeading><a name="V"></a>V</td><td></td></tr><tr><td class=ISymbolPrefix id=IOnlySymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/version-js.html#version.js"  class=ISymbol>version.js</a></td></tr><tr><td class=IHeading><a name="W"></a>W</td><td></td></tr><tr><td class=ISymbolPrefix id=IOnlySymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/noctua/widgets-js.html#widgets.js"  class=ISymbol>widgets.js</a></td></tr></table>
+<div id=Index><div class=IPageTitle>Class Index</div><div class=INavigationBar>$#! &middot; 0-9 &middot; A &middot; <a href="#B">B</a> &middot; <a href="#C">C</a> &middot; <a href="#D">D</a> &middot; <a href="#E">E</a> &middot; F &middot; G &middot; H &middot; I &middot; J &middot; K &middot; <a href="#L">L</a> &middot; <a href="#M">M</a> &middot; N &middot; O &middot; P &middot; Q &middot; <a href="#R">R</a> &middot; S &middot; T &middot; U &middot; <a href="#V">V</a> &middot; <a href="#W">W</a> &middot; X &middot; Y &middot; Z</div><table border=0 cellspacing=0 cellpadding=0><tr><td class=IHeading id=IFirstHeading><a name="B"></a>B</td><td></td></tr><tr><td class=ISymbolPrefix id=IFirstSymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/barista/client-js.html#bbopx.barista.client" id=link1 onMouseOver="ShowTip(event, 'tt1', 'link1')" onMouseOut="HideTip('tt1')" class=ISymbol>bbopx.<wbr>barista.<wbr>client</a></td></tr><tr><td class=ISymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/barista/response-js.html#bbopx.barista.response" id=link2 onMouseOver="ShowTip(event, 'tt2', 'link2')" onMouseOut="HideTip('tt2')" class=ISymbol>bbopx.<wbr>barista.<wbr>response</a></td></tr><tr><td class=ISymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/minerva/manager-js.html#bbopx.minerva.manager" id=link3 onMouseOver="ShowTip(event, 'tt3', 'link3')" onMouseOut="HideTip('tt3')" class=ISymbol>bbopx.<wbr>minerva.<wbr>manager</a></td></tr><tr><td class=ISymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/minerva/requests-js.html#bbopx.minerva.request" id=link4 onMouseOver="ShowTip(event, 'tt4', 'link4')" onMouseOut="HideTip('tt4')" class=ISymbol>bbopx.<wbr>minerva.<wbr>request</a></td></tr><tr><td class=ISymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/minerva/requests-js.html#bbopx.minerva.request_set" id=link5 onMouseOver="ShowTip(event, 'tt5', 'link5')" onMouseOut="HideTip('tt5')" class=ISymbol>bbopx.<wbr>minerva.<wbr>request_set</a></td></tr><tr><td class=ISymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/minerva/requests-js.html#bbopx.minerva.request_variable" id=link6 onMouseOver="ShowTip(event, 'tt6', 'link6')" onMouseOut="HideTip('tt6')" class=ISymbol>bbopx.<wbr>minerva.<wbr>request_variable</a></td></tr><tr><td class=ISymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/noctua/draggable-canvas-js.html#bbopx.noctua.draggable_canvas" id=link7 onMouseOver="ShowTip(event, 'tt7', 'link7')" onMouseOut="HideTip('tt7')" class=ISymbol>bbopx.<wbr>noctua.<wbr>draggable_canvas</a></td></tr><tr><td class=ISymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/noctua/edit-js.html#bbopx.noctua.edit.annotation" id=link8 onMouseOver="ShowTip(event, 'tt8', 'link8')" onMouseOut="HideTip('tt8')" class=ISymbol>bbopx.<wbr>noctua.<wbr>edit.<wbr>annotation</a></td></tr><tr><td class=ISymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/noctua/location-store-js.html#bbopx.noctua.location-store" id=link9 onMouseOver="ShowTip(event, 'tt9', 'link9')" onMouseOut="HideTip('tt9')" class=ISymbol>bbopx.<wbr>noctua.<wbr>location-store</a></td></tr><tr><td class=ISymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/noctua/widgets-js.html#bbopx.noctua.widgets" id=link10 onMouseOver="ShowTip(event, 'tt10', 'link10')" onMouseOut="HideTip('tt10')" class=ISymbol>bbopx.<wbr>noctua.<wbr>widgets</a></td></tr><tr><td class=ISymbolPrefix id=ILastSymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/version-js.html#bbopx.version" id=link11 onMouseOver="ShowTip(event, 'tt11', 'link11')" onMouseOut="HideTip('tt11')" class=ISymbol>bbopx.<wbr>version</a></td></tr><tr><td class=IHeading><a name="C"></a>C</td><td></td></tr><tr><td class=ISymbolPrefix id=IFirstSymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/barista/client-js.html#client.js"  class=ISymbol>client.js</a></td></tr><tr><td class=ISymbolPrefix id=ILastSymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/noctua/context-js.html#context.js" id=link12 onMouseOver="ShowTip(event, 'tt12', 'link12')" onMouseOut="HideTip('tt12')" class=ISymbol>context.js</a></td></tr><tr><td class=IHeading><a name="D"></a>D</td><td></td></tr><tr><td class=ISymbolPrefix id=IOnlySymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/noctua/draggable-canvas-js.html#draggable-canvas.js"  class=ISymbol>draggable-canvas.js</a></td></tr><tr><td class=IHeading><a name="E"></a>E</td><td></td></tr><tr><td class=ISymbolPrefix id=IOnlySymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/noctua/edit-js.html#edit.js" id=link13 onMouseOver="ShowTip(event, 'tt13', 'link13')" onMouseOut="HideTip('tt13')" class=ISymbol>edit.js</a></td></tr><tr><td class=IHeading><a name="L"></a>L</td><td></td></tr><tr><td class=ISymbolPrefix id=IOnlySymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/noctua/location-store-js.html#location-store.js"  class=ISymbol>location-store.js</a></td></tr><tr><td class=IHeading><a name="M"></a>M</td><td></td></tr><tr><td class=ISymbolPrefix id=IOnlySymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/minerva/manager-js.html#manager.js"  class=ISymbol>manager.js</a></td></tr><tr><td class=IHeading><a name="R"></a>R</td><td></td></tr><tr><td class=ISymbolPrefix id=IFirstSymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/minerva/requests-js.html#requests.js"  class=ISymbol>requests.js</a></td></tr><tr><td class=ISymbolPrefix id=ILastSymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/barista/response-js.html#response.js"  class=ISymbol>response.js</a></td></tr><tr><td class=IHeading><a name="V"></a>V</td><td></td></tr><tr><td class=ISymbolPrefix id=IOnlySymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/version-js.html#version.js"  class=ISymbol>version.js</a></td></tr><tr><td class=IHeading><a name="W"></a>W</td><td></td></tr><tr><td class=ISymbolPrefix id=IOnlySymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/noctua/widgets-js.html#widgets.js"  class=ISymbol>widgets.js</a></td></tr></table>
 <!--START_ND_TOOLTIPS-->
-<div class=CToolTip id="tt1"><div class=CClass>Let&rsquo;s try and communicate with the socket.io server (Barista) for messages and the like--client-to-client communication.</div></div><div class=CToolTip id="tt2"><div class=CClass>Generic BBOP handler for dealing with the gross parsing of responses from the GO Molecular Model Manager REST server JSON responses.</div></div><div class=CToolTip id="tt3"><div class=CClass>jQuery manager for communication with Minerva (via Barista).</div></div><div class=CToolTip id="tt4"><div class=CClass>Handle requests to Minerva in a somewhat structured way.</div></div><div class=CToolTip id="tt5"><div class=CClass>Handle sets of requests and serialize for Minerva call.</div></div><div class=CToolTip id="tt6"><div class=CClass>Internal usage variable for keeping track of implicit assignToVariable on the client (see Minerva).</div></div><div class=CToolTip id="tt7"><div class=CClass>Playing with graph area scroll. </div></div><div class=CToolTip id="tt8"><div class=CClass>Simple abstraction to take care of operating on stored locations.</div></div><div class=CToolTip id="tt9"><div class=CClass>Namespace for large drawing routines.</div></div><div class=CToolTip id="tt10"><div class=CClass>This package was automatically generated during the build process and contains its version information--this is the release of the API that you have.</div></div><!--END_ND_TOOLTIPS-->
+<div class=CToolTip id="tt1"><div class=CClass>Let&rsquo;s try and communicate with the socket.io server (Barista) for messages and the like--client-to-client communication.</div></div><div class=CToolTip id="tt2"><div class=CClass>Generic BBOP handler for dealing with the gross parsing of responses from the GO Molecular Model Manager REST server JSON responses.</div></div><div class=CToolTip id="tt3"><div class=CClass>jQuery manager for communication with Minerva (via Barista).</div></div><div class=CToolTip id="tt4"><div class=CClass>Handle requests to Minerva in a somewhat structured way.</div></div><div class=CToolTip id="tt5"><div class=CClass>Handle sets of requests and serialize for Minerva call.</div></div><div class=CToolTip id="tt6"><div class=CClass>Internal usage variable for keeping track of implicit assignToVariable on the client (see Minerva).</div></div><div class=CToolTip id="tt7"><div class=CClass>Playing with graph area scroll. </div></div><div class=CToolTip id="tt8"><div class=CClass>Object for keeping track of our annotations.</div></div><div class=CToolTip id="tt9"><div class=CClass>Simple abstraction to take care of operating on stored locations.</div></div><div class=CToolTip id="tt10"><div class=CClass>Namespace for large drawing routines.</div></div><div class=CToolTip id="tt11"><div class=CClass>This package was automatically generated during the build process and contains its version information--this is the release of the API that you have.</div></div><!--END_ND_TOOLTIPS-->
 
 
 <!--START_ND_TOOLTIPS-->
-<div class=CToolTip id="tt11"><div class=CClass>A handful of functions for drawing entities in different contexts.</div></div><!--END_ND_TOOLTIPS-->
+<div class=CToolTip id="tt12"><div class=CClass>A handful of functions for drawing entities in different contexts.</div></div><!--END_ND_TOOLTIPS-->
 
 
 <!--START_ND_TOOLTIPS-->
 <!--END_ND_TOOLTIPS-->
 
 
+<!--START_ND_TOOLTIPS-->
+<div class=CToolTip id="tt13"><div class=CClass>Core edit model.</div></div><!--END_ND_TOOLTIPS-->
+
+
 <!--START_ND_TOOLTIPS-->
 <!--END_ND_TOOLTIPS-->
 

diff --git a/docs/index/Files.html b/docs/index/Files.html
@@ -11,11 +11,7 @@
 
 
 
-<div id=Index><div class=IPageTitle>File Index</div><div class=INavigationBar>$#! &middot; 0-9 &middot; A &middot; B &middot; <a href="#C">C</a> &middot; D &middot; <a href="#E">E</a> &middot; F &middot; G &middot; H &middot; I &middot; J &middot; K &middot; L &middot; M &middot; N &middot; O &middot; P &middot; Q &middot; R &middot; S &middot; T &middot; U &middot; V &middot; W &middot; X &middot; Y &middot; Z</div><table border=0 cellspacing=0 cellpadding=0><tr><td class=IHeading id=IFirstHeading><a name="C"></a>C</td><td></td></tr><tr><td class=ISymbolPrefix id=IOnlySymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/minerva/class_expression-js.html#class_expression.js"  class=ISymbol>class_expression.js</a></td></tr><tr><td class=IHeading><a name="E"></a>E</td><td></td></tr><tr><td class=ISymbolPrefix id=IOnlySymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/noctua/edit-js.html#edit.js"  class=ISymbol>edit.js</a></td></tr></table>
-<!--START_ND_TOOLTIPS-->
-<!--END_ND_TOOLTIPS-->
-
-
+<div id=Index><div class=IPageTitle>File Index</div><div class=INavigationBar>$#! &middot; 0-9 &middot; A &middot; B &middot; <a href="#C">C</a> &middot; D &middot; E &middot; F &middot; G &middot; H &middot; I &middot; J &middot; K &middot; L &middot; M &middot; N &middot; O &middot; P &middot; Q &middot; R &middot; S &middot; T &middot; U &middot; V &middot; W &middot; X &middot; Y &middot; Z</div><table border=0 cellspacing=0 cellpadding=0><tr><td class=IHeading id=IFirstHeading><a name="C"></a>C</td><td></td></tr><tr><td class=ISymbolPrefix id=IOnlySymbolPrefix>&nbsp;</td><td class=IEntry><a href="../files/minerva/class_expression-js.html#class_expression.js"  class=ISymbol>class_expression.js</a></td></tr></table>
 <!--START_ND_TOOLTIPS-->
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diff --git a/docs/index/Functions.html b/docs/index/Functions.html