updated user password reset, added starter documentation reads

beak-insights · Dec 30, 2023 · 5edeb38 · 5edeb38
1 parent cfdfc24
commit 5edeb38
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Showing 166 changed files with 9,843 additions and 3,633 deletions.
diff --git a/.idea/workspace.xml b/.idea/workspace.xml
diff --git a/Maturity Framework – Global Laboratory eTools.pdf b/Maturity Framework – Global Laboratory eTools.pdf
diff --git a/felicity/api/deps.py b/felicity/api/deps.py
@@ -37,11 +37,15 @@ async def _get_user(token: str):
     return await models.User.get(uid=token_data.sub)
 
 
-async def get_current_user(token: Annotated[str, Depends(oauth2_scheme)]) -> models.User | None:
+async def get_current_user(
+    token: Annotated[str, Depends(oauth2_scheme)]
+) -> models.User | None:
     return await _get_user(token)
 
 
-async def get_current_active_user(token: Annotated[str, Depends(oauth2_scheme)]) -> models.User | None:
+async def get_current_active_user(
+    token: Annotated[str, Depends(oauth2_scheme)]
+) -> models.User | None:
     current_user = await _get_user(token)
     if not current_user or not current_user.is_active:
         return None

diff --git a/felicity/api/gql/analysis/mutations/analysis_profile.py b/felicity/api/gql/analysis/mutations/analysis_profile.py
@@ -98,7 +98,7 @@ async def create_profile(info, payload: ProfileInputType) -> AnalysisProfileResp
             )
 
     await utils.billing_setup_profiles([profile.uid])
-    
+
     profile = await analysis_models.Profile.get(uid=profile.uid)
     return a_types.ProfileType(**profile.marshal_simple())
 

diff --git a/felicity/api/gql/analysis/mutations/analysis_request.py b/felicity/api/gql/analysis/mutations/analysis_request.py
@@ -95,7 +95,7 @@ class AnalysisRequestInputType:
 
 @strawberry.mutation(permission_classes=[IsAuthenticated])
 async def create_analysis_request(
-        info, payload: AnalysisRequestInputType
+    info, payload: AnalysisRequestInputType
 ) -> AnalysisRequestResponse:
     logger.info("Received request to create analysis request")
 
@@ -234,7 +234,7 @@ async def create_analysis_request(
                     update={
                         "analysis_uid": _service.uid,
                         "due_date": datetime.now()
-                                    + timedelta(minutes=_service.tat_length_minutes)
+                        + timedelta(minutes=_service.tat_length_minutes)
                         if _service.tat_length_minutes
                         else None,
                     }
@@ -253,7 +253,7 @@ async def create_analysis_request(
         uid=analysis_request.uid, related=["samples"]
     )
 
-    # 
+    #
     await bill_order(analysis_request, auto_bill=True)
 
     return a_types.AnalysisRequestWithSamples(**analysis_request.marshal_simple())
@@ -413,7 +413,7 @@ async def verify_samples(info, samples: List[str]) -> SampleActionResponse:
 
 @strawberry.mutation(permission_classes=[IsAuthenticated])
 async def reject_samples(
-        info, samples: List[SampleRejectInputType]
+    info, samples: List[SampleRejectInputType]
 ) -> SampleActionResponse:
     is_authenticated, felicity_user = await auth_from_info(info)
     verify_user_auth(
@@ -456,7 +456,7 @@ async def reject_samples(
 
 @strawberry.mutation(permission_classes=[IsAuthenticated])
 async def publish_samples(
-        info, samples: List[SamplePublishInputType]
+    info, samples: List[SamplePublishInputType]
 ) -> SuccessErrorResponse:
     is_authenticated, felicity_user = await auth_from_info(info)
     verify_user_auth(

diff --git a/felicity/api/gql/analysis/mutations/analysis_service.py b/felicity/api/gql/analysis/mutations/analysis_service.py
@@ -103,15 +103,17 @@ async def create_analysis(info, payload: AnalysisInputType) -> ProfilesServiceRe
 
     analysis = await analysis_models.Analysis.get(uid=analysis.uid)
     profiles = await analysis_models.Profile.get_all(analyses___uid=analysis.uid)
-    
+
     await utils.billing_setup_analysis([analysis.uid])
 
-    return a_types.AnalysisWithProfiles(**{**analysis.marshal_simple(), "profiles": profiles})
+    return a_types.AnalysisWithProfiles(
+        **{**analysis.marshal_simple(), "profiles": profiles}
+    )
 
 
 @strawberry.mutation(permission_classes=[IsAuthenticated])
 async def update_analysis(
-        info, uid: str, payload: AnalysisInputType
+    info, uid: str, payload: AnalysisInputType
 ) -> ProfilesServiceResponse:
     is_authenticated, felicity_user = await auth_from_info(info)
     verify_user_auth(
@@ -156,12 +158,14 @@ async def update_analysis(
 
     profiles = analysis_models.Profile.get_all(analyses___uid=analysis.uid)
 
-    return a_types.AnalysisWithProfiles(**{**analysis.marshal_simple(), "profiles": profiles})
+    return a_types.AnalysisWithProfiles(
+        **{**analysis.marshal_simple(), "profiles": profiles}
+    )
 
 
 @strawberry.mutation(permission_classes=[IsAuthenticated])
 async def create_analysis_mapping(
-        info, payload: AnalysisMappingInputType
+    info, payload: AnalysisMappingInputType
 ) -> AnalysisMappingResponse:
     is_authenticated, felicity_user = await auth_from_info(info)
     verify_user_auth(
@@ -190,7 +194,7 @@ async def create_analysis_mapping(
 
 @strawberry.mutation(permission_classes=[IsAuthenticated])
 async def update_analysis_mapping(
-        info, uid: str, payload: AnalysisMappingInputType
+    info, uid: str, payload: AnalysisMappingInputType
 ) -> AnalysisMappingResponse:
     is_authenticated, felicity_user = await auth_from_info(info)
     verify_user_auth(

diff --git a/felicity/api/gql/auth/__init__.py b/felicity/api/gql/auth/__init__.py
@@ -19,7 +19,7 @@ async def auth_from_info(info) -> Tuple[bool, Optional[User]]:
 
 
 def verify_user_auth(
-        is_auth: bool = False, user=None, err_msg: str = None
+    is_auth: bool = False, user=None, err_msg: str = None
 ) -> Tuple[bool, Optional[OperationError]]:
     if not is_auth:
         return False, OperationError(

diff --git a/felicity/api/gql/billing/__init__.py b/felicity/api/gql/billing/__init__.py
@@ -10,7 +10,7 @@
     TestBillEdge,
     TestBillCursorPage,
     TestBillTransactionType,
-    TestBillInvoiceType
+    TestBillInvoiceType,
 )
 
 billing_types = [
@@ -27,6 +27,3 @@
     TestBillTransactionType,
     TestBillInvoiceType,
 ]
-
-
-
diff --git a/felicity/api/gql/billing/mutations.py b/felicity/api/gql/billing/mutations.py
@@ -6,10 +6,14 @@
 
 from api.gql.auth import auth_from_info, verify_user_auth
 from api.gql.billing.types import (
-    ProfilePriceType, ProfileDiscountType,
-    AnalysisPriceType, AnalysisDiscountType,
-    VoucherType, VoucherCodeType,
-    TestBillTransactionType, TestBillType
+    ProfilePriceType,
+    ProfileDiscountType,
+    AnalysisPriceType,
+    AnalysisDiscountType,
+    VoucherType,
+    VoucherCodeType,
+    TestBillTransactionType,
+    TestBillType,
 )
 from api.gql.permissions import IsAuthenticated
 from api.gql.types import OperationError
@@ -29,11 +33,15 @@
 )
 
 ProfileDiscountResponse = strawberry.union(
-    "ProfileDiscountResponse", (ProfileDiscountType, OperationError), description=""  # noqa
+    "ProfileDiscountResponse",
+    (ProfileDiscountType, OperationError),
+    description="",  # noqa
 )
 
 AnalysisDiscountResponse = strawberry.union(
-    "AnalysisDiscountResponse", (AnalysisDiscountType, OperationError), description=""  #
+    "AnalysisDiscountResponse",
+    (AnalysisDiscountType, OperationError),
+    description="",  #
 )
 
 VoucherResponse = strawberry.union(
@@ -45,7 +53,9 @@
 )
 
 TestBillTransactionResponse = strawberry.union(
-    "TestBillTransactionResponse", (TestBillTransactionType, OperationError), description=""  #
+    "TestBillTransactionResponse",
+    (TestBillTransactionType, OperationError),
+    description="",  #
 )
 
 TestBillResponse = strawberry.union(
@@ -107,7 +117,9 @@ class ApplyVoucherInput:
 @strawberry.type
 class BillingMutations:
     @strawberry.mutation(permission_classes=[IsAuthenticated])
-    async def update_profile_price(self, info: Info, uid: str, payload: PriceInput) -> ProfilePriceResponse:
+    async def update_profile_price(
+        self, info: Info, uid: str, payload: PriceInput
+    ) -> ProfilePriceResponse:
         _, felicity_user = await auth_from_info(info)
 
         profile_price = await models.ProfilePrice.get(uid=uid)
@@ -122,7 +134,9 @@ async def update_profile_price(self, info: Info, uid: str, payload: PriceInput)
         return ProfilePriceType(**profile_price.marshal_simple())
 
     @strawberry.mutation(permission_classes=[IsAuthenticated])
-    async def update_analysis_price(self, info: Info, uid: str, payload: PriceInput) -> AnalysisPriceResponse:
+    async def update_analysis_price(
+        self, info: Info, uid: str, payload: PriceInput
+    ) -> AnalysisPriceResponse:
         _, felicity_user = await auth_from_info(info)
 
         analysis_price = await models.AnalysisPrice.get(uid=uid)
@@ -138,7 +152,7 @@ async def update_analysis_price(self, info: Info, uid: str, payload: PriceInput)
 
     @strawberry.mutation(permission_classes=[IsAuthenticated])
     async def update_profile_discount(
-            self, info, uid: str, payload: PriceDiscountInput
+        self, info, uid: str, payload: PriceDiscountInput
     ) -> ProfileDiscountResponse:
         _, felicity_user = await auth_from_info(info)
 
@@ -168,13 +182,17 @@ async def update_profile_discount(
             "updated_by_uid": felicity_user.uid,
         }
 
-        obj_in = schemas.ProfileDiscountUpdate(**{**profile_discount.to_dict(), **update_in})
+        obj_in = schemas.ProfileDiscountUpdate(
+            **{**profile_discount.to_dict(), **update_in}
+        )
         profile_discount = await profile_discount.update(obj_in)
-        return ProfileDiscountType(**profile_discount.marshal_simple(), )
+        return ProfileDiscountType(
+            **profile_discount.marshal_simple(),
+        )
 
     @strawberry.mutation(permission_classes=[IsAuthenticated])
     async def update_analysis_discount(
-            self, info, uid: str, payload: PriceDiscountInput
+        self, info, uid: str, payload: PriceDiscountInput
     ) -> AnalysisDiscountResponse:
         _, felicity_user = await auth_from_info(info)
 
@@ -199,13 +217,15 @@ async def update_analysis_discount(
             "created_by_uid": felicity_user.uid,
             "updated_by_uid": felicity_user.uid,
         }
-        obj_in = schemas.AnalysisDiscountUpdate(**{**analysis_discount.to_dict(), **update_in})
+        obj_in = schemas.AnalysisDiscountUpdate(
+            **{**analysis_discount.to_dict(), **update_in}
+        )
         analysis_discount = await analysis_discount.update(obj_in)
         return AnalysisDiscountType(**analysis_discount.marshal_simple())
 
     @strawberry.mutation(permission_classes=[IsAuthenticated])
     async def create_voucher(
-            self, info: Info, payload: VoucherInput
+        self, info: Info, payload: VoucherInput
     ) -> VoucherResponse:
 
         is_authenticated, felicity_user = await auth_from_info(info)
@@ -219,9 +239,7 @@ async def create_voucher(
 
         exists = await models.Voucher.get(name=payload.name)
         if exists:
-            return OperationError(
-                error=f"Voucher {payload.name} already exists"
-            )
+            return OperationError(error=f"Voucher {payload.name} already exists")
 
         incoming: dict = {
             "created_by_uid": felicity_user.uid,
@@ -236,7 +254,7 @@ async def create_voucher(
 
     @strawberry.mutation(permission_classes=[IsAuthenticated])
     async def update_voucher(
-            self, info, uid: str, payload: VoucherInput
+        self, info, uid: str, payload: VoucherInput
     ) -> VoucherResponse:
 
         is_authenticated, felicity_user = await auth_from_info(info)
@@ -268,7 +286,7 @@ async def update_voucher(
 
     @strawberry.mutation(permission_classes=[IsAuthenticated])
     async def create_voucher_code(
-            self, info: Info, payload: VoucherCodeInput
+        self, info: Info, payload: VoucherCodeInput
     ) -> VoucherCodeResponse:
 
         is_authenticated, felicity_user = await auth_from_info(info)
@@ -282,9 +300,7 @@ async def create_voucher_code(
 
         exists = await models.VoucherCode.get(code=payload.code)
         if exists:
-            return OperationError(
-                error=f"Voucher Code {payload.code} already exists"
-            )
+            return OperationError(error=f"Voucher Code {payload.code} already exists")
 
         incoming: dict = {
             "created_by_uid": felicity_user.uid,
@@ -299,7 +315,7 @@ async def create_voucher_code(
 
     @strawberry.mutation(permission_classes=[IsAuthenticated])
     async def update_voucher_code(
-            self, info, uid: str, payload: VoucherCodeInput
+        self, info, uid: str, payload: VoucherCodeInput
     ) -> VoucherCodeResponse:
 
         is_authenticated, felicity_user = await auth_from_info(info)
@@ -331,7 +347,7 @@ async def update_voucher_code(
 
     @strawberry.mutation(permission_classes=[IsAuthenticated])
     async def create_test_bill_transaction(
-            self, info, payload: BillTransactionInput
+        self, info, payload: BillTransactionInput
     ) -> TestBillTransactionResponse:
 
         is_authenticated, felicity_user = await auth_from_info(info)
@@ -343,7 +359,7 @@ async def create_test_bill_transaction(
         if payload.amount <= 0:
             return OperationError(
                 error="Invalid transaction Amount.",
-                suggestion="Transaction amount must be greater than 0"
+                suggestion="Transaction amount must be greater than 0",
             )
 
         test_bill = await models.TestBill.get(uid=payload.test_bill_uid)
@@ -362,7 +378,7 @@ async def create_test_bill_transaction(
 
         test_bill_update = {
             "total_paid": test_bill.total_paid + tbt.amount,
-            "partial": True
+            "partial": True,
         }
         if test_bill_update["total_paid"] >= test_bill.total_charged:
             test_bill_update["partial"] = False
@@ -383,7 +399,7 @@ async def create_test_bill_transaction(
 
     @strawberry.mutation(permission_classes=[IsAuthenticated])
     async def apply_voucher(
-            self, info, payload: ApplyVoucherInput
+        self, info, payload: ApplyVoucherInput
     ) -> TestBillTransactionResponse:
 
         is_authenticated, felicity_user = await auth_from_info(info)
@@ -392,5 +408,7 @@ async def apply_voucher(
             felicity_user,
             "Only Authenticated user can add test bill transactions",
         )
-        bill = await utils.apply_voucher(payload.voucher_code, payload.test_bill_uid, payload.customer_uid)
+        bill = await utils.apply_voucher(
+            payload.voucher_code, payload.test_bill_uid, payload.customer_uid
+        )
         return TestBillType(**bill.marshal_simple(exclude=["orders"]))
-Original file line number
+Diff line change
@@ Expand Up @@
                 )
         await utils.billing_setup_profiles([profile.uid])
         profile = await analysis_models.Profile.get(uid=profile.uid)
         return a_types.ProfileType(**profile.marshal_simple())
@@ Expand Down @@