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Issues list

Cached inputs are incongruent with what STRING transformer expects -> FileNotFoundError bug Something isn't working
#473 opened Aug 3, 2023 by caufieldjh
1
Verify single SOT for NCBI Taxon class relationships bug Something isn't working
#464 opened Nov 17, 2022 by caufieldjh
Check on ingested CL terms and verify CP terms are not included bug Something isn't working
#463 opened Nov 17, 2022 by caufieldjh
Knowledge source on edges is unclear bug Something isn't working
#462 opened Nov 17, 2022 by caufieldjh
Update OntologyClass node categories bug Something isn't working
#461 opened Nov 17, 2022 by caufieldjh
Resolve duplicated edge categories bug Something isn't working
#460 opened Nov 17, 2022 by caufieldjh
Compressed graph incorrectly includes relative local path bug Something isn't working
#459 opened Nov 4, 2022 by caufieldjh
404 error on chembl_28_molecule data bug Something isn't working
#458 opened Jun 13, 2022 by caufieldjh
Improve normalization of proteins bug Something isn't working
#386 opened Jan 5, 2021 by justaddcoffee
1
ORF10 missing in GPI file source bug Something isn't working
#379 opened Dec 3, 2020 by realmarcin
@realmarcin
interactions disappeared between 20201001 and 20201101 nt files bug Something isn't working
#376 opened Nov 21, 2020 by realmarcin
1
malformed index.html in build base directories bug Something isn't working
#373 opened Nov 8, 2020 by justaddcoffee
URLs from http://identifiers.org/mesh are missing label bug Something isn't working
#341 opened Sep 18, 2020 by kliegr
1
Ingests that use symmetric edge_labels (like interacts_with) should assert edge in both directions bug Something isn't working enhancement New feature or request
#328 opened Sep 3, 2020 by justaddcoffee
1
Build contains 8k or so singleton nodes bug Something isn't working
#301 opened Jul 28, 2020 by justaddcoffee
edges.tsv for ChEMBL ingest contains IDs not in nodes.tsv bug Something isn't working
#264 opened Jul 4, 2020 by justaddcoffee
incompatbile use patterns for bl:interacts_with bug Something isn't working
#233 opened Jun 16, 2020 by matentzn
@justaddcoffee
4
Some edges in the SciBite co-occurrence data contain nodes not present in the nodes TSV file bug Something isn't working
#219 opened Jun 10, 2020 by justaddcoffee
5
for graph learning edge set samples, all nodes in all edges sets need to be present in the positive training set bug Something isn't working
#215 opened Jun 9, 2020 by realmarcin
Duplicate nodes in intact nodes.tsv bug Something isn't working
#173 opened May 22, 2020 by justaddcoffee
remove triples in which the IRI of the subject and object are the same bug Something isn't working
#128 opened May 4, 2020 by wdduncan
@deepakunni3
3
ProTip! Exclude everything labeled bug with -label:bug.