On 2/13/2024 all packages previously hosted here can be found at https://github.com/pirl-unc

They include:

• fastmultiqc - https://github.com/pirl-unc/fastmultiqc
• rserver-sc - https://github.com/pirl-unc/rserver-sc
• trust - https://github.com/pirl-unc/trust
• MiXCR - https://github.com/pirl-unc/MiXCR
• MiXCR-2.1.7 - https://github.com/pirl-unc/MiXCR-2.1.7
• MiXCR-amplicon-2.1.7 - https://github.com/pirl-unc/MiXCR-amplicon-2.1.7
• Bowtie2 - https://github.com/pirl-unc/Bowtie2
• stig - https://github.com/pirl-unc/stig
• HLAProfiler - https://github.com/pirl-unc/HLAProfiler
• VincentLabFormatter - https://github.com/pirl-unc/VincentLabFormatter
• tide - https://github.com/pirl-unc/tide
• rserver-impro - https://github.com/pirl-unc/rserver-impro
• mhcgnomes - https://github.com/pirl-unc/mhcgnomes
• PostRNASeqAlign - https://github.com/pirl-unc/PostRNASeqAlign
• rserver - https://github.com/pirl-unc/rserver
• lenstools - https://github.com/pirl-unc/lenstools
• mHA-dockerfile - https://github.com/pirl-unc/mHA-dockerfile
• rserver-postproc-rnaseq - https://github.com/pirl-unc/rserver-postproc-rnaseq
• PrePostMiXCR - https://github.com/pirl-unc/PrePostMiXCR
• picard - https://github.com/pirl-unc/picard
• Landscape-and-Selection-of-Vaccine-Epitopes-in-SARS-CoV-2 - https://github.com/pirl-unc/Landscape-and-Selection-of-Vaccine-Epitopes-in-SARS-CoV-2
• Area51 - https://github.com/pirl-unc/Area51
• rserver-binfotron - https://github.com/pirl-unc/rserver-binfotron
• binfotron - https://github.com/pirl-unc/binfotron
• datasetprep - https://github.com/pirl-unc/datasetprep
• housekeeping - https://github.com/pirl-unc/housekeeping
• command-line-tools - https://github.com/pirl-unc/command-line-tools