The structure of supercoiled intermediates in DNA replication
- PMID: 9753328
- DOI: 10.1016/s0092-8674(00)81740-7
The structure of supercoiled intermediates in DNA replication
Abstract
We studied the structure of replication intermediates accumulated by Tus-induced arrest of plasmid DNA replication at termination sites. For intermediates generated both in vitro with purified components and in vivo, superhelical stress is distributed throughout the entire partially replicated molecule; daughter DNA segments are wound around each other, and the unreplicated region is supercoiled. Thus, unlinking of parental DNA strands by topoisomerases can be carried out both behind and in front of the replication fork. We explain why previous studies with prokaryotic and eukaryotic replication intermediates discerned only supercoiling in the unreplicated portion.
Similar articles
-
Supercoiling, knotting and replication fork reversal in partially replicated plasmids.Nucleic Acids Res. 2002 Feb 1;30(3):656-66. doi: 10.1093/nar/30.3.656. Nucleic Acids Res. 2002. PMID: 11809877 Free PMC article.
-
Knot what we thought before: the twisted story of replication.Bioessays. 1999 Oct;21(10):805-8. doi: 10.1002/(SICI)1521-1878(199910)21:10<805::AID-BIES1>3.0.CO;2-7. Bioessays. 1999. PMID: 10497329 Review.
-
Direct Evidence for the Formation of Precatenanes during DNA Replication.J Biol Chem. 2015 May 29;290(22):13725-35. doi: 10.1074/jbc.M115.642272. Epub 2015 Mar 31. J Biol Chem. 2015. PMID: 25829493 Free PMC article.
-
Knotting dynamics during DNA replication.Mol Microbiol. 2002 Nov;46(3):699-707. doi: 10.1046/j.1365-2958.2002.03217.x. Mol Microbiol. 2002. PMID: 12410827
-
Topological challenges to DNA replication: conformations at the fork.Proc Natl Acad Sci U S A. 2001 Jul 17;98(15):8219-26. doi: 10.1073/pnas.111006998. Proc Natl Acad Sci U S A. 2001. PMID: 11459956 Free PMC article. Review.
Cited by
-
Bullied no more: when and how DNA shoves proteins around.Q Rev Biophys. 2012 Aug;45(3):257-299. doi: 10.1017/S0033583512000054. Epub 2012 Jul 31. Q Rev Biophys. 2012. PMID: 22850561 Free PMC article. Review.
-
Genome-wide mapping of Topoisomerase I activity sites reveal its role in chromosome segregation.Nucleic Acids Res. 2019 Feb 20;47(3):1416-1427. doi: 10.1093/nar/gky1271. Nucleic Acids Res. 2019. PMID: 30566665 Free PMC article.
-
DNA topoisomerase II and its growing repertoire of biological functions.Nat Rev Cancer. 2009 May;9(5):327-37. doi: 10.1038/nrc2608. Epub 2009 Apr 20. Nat Rev Cancer. 2009. PMID: 19377505 Free PMC article. Review.
-
The precarious prokaryotic chromosome.J Bacteriol. 2014 May;196(10):1793-806. doi: 10.1128/JB.00022-14. Epub 2014 Mar 14. J Bacteriol. 2014. PMID: 24633873 Free PMC article. Review.
-
How topoisomerase IV can efficiently unknot and decatenate negatively supercoiled DNA molecules without causing their torsional relaxation.Nucleic Acids Res. 2016 Jun 2;44(10):4528-38. doi: 10.1093/nar/gkw311. Epub 2016 Apr 22. Nucleic Acids Res. 2016. PMID: 27106058 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources