Participation of ADP dissociation in the rate-determining step in cAMP-dependent protein kinase
- PMID: 9398302
- DOI: 10.1021/bi971438n
Participation of ADP dissociation in the rate-determining step in cAMP-dependent protein kinase
Abstract
Pre-steady-state kinetic analyses of the catalytic subunit of cAMP-dependent protein kinase showed that the rate constant for phosphoryl transfer is fast and either the release of one or both of the products or a conformational change controls turnover [Grant, B., & Adams, J. A. (1996) Biochemistry 35, 2022-2029]. To determine which step or steps control turnover in the wild-type enzyme, we used a catalytic trapping technique to measure directly the dissociation rate constant for ADP. The phosphorylation of two peptide substrates, LRRASLG and GRTGRRNSI, was monitored using a rapid quench flow technique under conditions where saturating concentrations of ADP were preequilibrated with the enzyme before excess ATP and one of the substrates were added to trap the free enzyme and to start the phosphorylation reaction. Under ADP preequilibration conditions, no 'burst' phase was observed, and although the rate of linear, steady-state turnover was unaffected, the net production of phosphopeptide lagged behind the non-preequilibrated control. This phenomenon occurs due to the slow release of the product, and kinetic modeling suggests that this effect can be explained if the dissociation rate constant for ADP is 24 s-1 and solely limits turnover (kcat = 23 s-1) for the phosphorylation of LRRASLG. Using GRTGRRNSI, the dissociation rate constant for ADP is 35 s-1 and limits turnover (kcat = 29 s-1) if the reaction is initiated by the addition of enzyme. Under preequilibration conditions with either ATP or GRTGRRNSI, turnover is approximately 50% lower, suggesting that ADP release may partially control this parameter. This preequilibration effect can be explained by slowly interconverting enzyme forms with specific peptide-induced turnover properties. These studies indicate that ADP release is an essential rate-limiting component for turnover but also suggests that other factors contribute subtly when the structure of the substrate is altered.
Similar articles
-
Identification of a partially rate-determining step in the catalytic mechanism of cAMP-dependent protein kinase: a transient kinetic study using stopped-flow fluorescence spectroscopy.Biochemistry. 1997 Jun 3;36(22):6717-24. doi: 10.1021/bi963164u. Biochemistry. 1997. PMID: 9184152
-
An ATP-linked structural change in protein kinase A precedes phosphoryl transfer under physiological magnesium concentrations.Biochemistry. 1999 Apr 27;38(17):5572-81. doi: 10.1021/bi982768q. Biochemistry. 1999. PMID: 10220345
-
Detection of conformational changes along the kinetic pathway of protein kinase A using a catalytic trapping technique.Biochemistry. 1999 Sep 14;38(37):12072-9. doi: 10.1021/bi991109q. Biochemistry. 1999. PMID: 10508411
-
Solving the common problem: matching ATP synthesis to ATP demand during exercise.Adv Vet Sci Comp Med. 1994;38A:41-56. Adv Vet Sci Comp Med. 1994. PMID: 7801835 Review.
-
The missing hydrogen ion, part-2: Where the evidence leads to.Sports Med Health Sci. 2024 Jan 15;6(1):94-100. doi: 10.1016/j.smhs.2024.01.001. eCollection 2024 Mar. Sports Med Health Sci. 2024. PMID: 38463661 Free PMC article. Review.
Cited by
-
CaM Kinase: Still Inspiring at 40.Neuron. 2019 Aug 7;103(3):380-394. doi: 10.1016/j.neuron.2019.05.033. Neuron. 2019. PMID: 31394063 Free PMC article. Review.
-
Ligand-induced global transitions in the catalytic domain of protein kinase A.Proc Natl Acad Sci U S A. 2009 Mar 3;106(9):3023-8. doi: 10.1073/pnas.0813266106. Epub 2009 Feb 9. Proc Natl Acad Sci U S A. 2009. PMID: 19204278 Free PMC article.
-
Liberated PKA Catalytic Subunits Associate with the Membrane via Myristoylation to Preferentially Phosphorylate Membrane Substrates.Cell Rep. 2017 Apr 18;19(3):617-629. doi: 10.1016/j.celrep.2017.03.070. Cell Rep. 2017. PMID: 28423323 Free PMC article.
-
The membrane environment can promote or suppress bistability in cell signaling networks.J Phys Chem B. 2012 Mar 22;116(11):3630-40. doi: 10.1021/jp2102385. Epub 2012 Mar 13. J Phys Chem B. 2012. PMID: 22332778 Free PMC article.
-
Insights into nucleotide binding in protein kinase A using fluorescent adenosine derivatives.Protein Sci. 2000 Sep;9(9):1818-27. doi: 10.1110/ps.9.9.1818. Protein Sci. 2000. PMID: 11045627 Free PMC article.
Publication types
MeSH terms
Substances
Grants and funding
LinkOut - more resources
Full Text Sources
Other Literature Sources