A model for a partnership of lipid transfer proteins and scramblases in membrane expansion and organelle biogenesis
- PMID: 33850023
- PMCID: PMC8072408
- DOI: 10.1073/pnas.2101562118
A model for a partnership of lipid transfer proteins and scramblases in membrane expansion and organelle biogenesis
Abstract
The autophagy protein ATG2, proposed to transfer bulk lipid from the endoplasmic reticulum (ER) during autophagosome biogenesis, interacts with ER residents TMEM41B and VMP1 and with ATG9, in Golgi-derived vesicles that initiate autophagosome formation. In vitro assays reveal TMEM41B, VMP1, and ATG9 as scramblases. We propose a model wherein membrane expansion results from the partnership of a lipid transfer protein, moving lipids between the cytosolic leaflets of apposed organelles, and scramblases that reequilibrate the leaflets of donor and acceptor organelle membranes as lipids are depleted or augmented. TMEM41B and VMP1 are implicated broadly in lipid homeostasis and membrane dynamics processes in which their scrambling activities likely are key.
Keywords: ATG9A; TMEM41B; VMP1; scramblase.
Copyright © 2021 the Author(s). Published by PNAS.
Conflict of interest statement
The authors declare no competing interest.
Comment in
-
An alliance between lipid transfer proteins and scramblases for membrane expansion.Fac Rev. 2022 Aug 16;11:22. doi: 10.12703/r-01-0000015. eCollection 2022. Fac Rev. 2022. PMID: 36081427 Free PMC article.
Similar articles
-
TMEM41B and VMP1 are phospholipid scramblases.Autophagy. 2021 Aug;17(8):2048-2050. doi: 10.1080/15548627.2021.1937898. Epub 2021 Jun 12. Autophagy. 2021. PMID: 34074213 Free PMC article. Review.
-
--Atg9 interactions via its transmembrane domains are required for phagophore expansion during autophagy.Autophagy. 2023 May;19(5):1459-1478. doi: 10.1080/15548627.2022.2136340. Epub 2022 Nov 10. Autophagy. 2023. PMID: 36354155 Free PMC article.
-
TMEM41B and VMP1 are scramblases and regulate the distribution of cholesterol and phosphatidylserine.J Cell Biol. 2021 Jun 7;220(6):e202103105. doi: 10.1083/jcb.202103105. J Cell Biol. 2021. PMID: 33929485 Free PMC article.
-
Autophagosome formation in relation to the endoplasmic reticulum.J Biomed Sci. 2020 Oct 22;27(1):97. doi: 10.1186/s12929-020-00691-6. J Biomed Sci. 2020. PMID: 33087127 Free PMC article. Review.
-
Lipid Transport from Endoplasmic Reticulum to Autophagic Membranes.Cold Spring Harb Perspect Biol. 2022 Nov 1;14(11):a041254. doi: 10.1101/cshperspect.a041254. Cold Spring Harb Perspect Biol. 2022. PMID: 35940912 Free PMC article. Review.
Cited by
-
Structural basis for lipid transfer by the ATG2A-ATG9A complex.Nat Struct Mol Biol. 2025 Jan;32(1):35-47. doi: 10.1038/s41594-024-01376-6. Epub 2024 Aug 22. Nat Struct Mol Biol. 2025. PMID: 39174844
-
Phospholipids are imported into mitochondria by VDAC, a dimeric beta barrel scramblase.Nat Commun. 2023 Dec 8;14(1):8115. doi: 10.1038/s41467-023-43570-y. Nat Commun. 2023. PMID: 38065946 Free PMC article.
-
Autophagosome Biogenesis.Cells. 2023 Feb 20;12(4):668. doi: 10.3390/cells12040668. Cells. 2023. PMID: 36831335 Free PMC article. Review.
-
In vitro and in vivo assay of the ER lipid scramblase TMEM41B.STAR Protoc. 2022 Apr 19;3(2):101333. doi: 10.1016/j.xpro.2022.101333. eCollection 2022 Jun 17. STAR Protoc. 2022. PMID: 35496801 Free PMC article.
-
Post-translational modifications of ATG8 proteins - an emerging mechanism of autophagy control.J Cell Sci. 2023 Aug 15;136(16):jcs259725. doi: 10.1242/jcs.259725. Epub 2023 Aug 15. J Cell Sci. 2023. PMID: 37589340 Free PMC article. Review.
References
-
- Osawa T., et al. ., Atg2 mediates direct lipid transfer between membranes for autophagosome formation. Nat. Struct. Mol. Biol. 26, 281–288 (2019). - PubMed
-
- Young A. R., et al. ., Starvation and ULK1-dependent cycling of mammalian Atg9 between the TGN and endosomes. J. Cell Sci. 119, 3888–3900 (2006). - PubMed
Publication types
MeSH terms
Substances
Grants and funding
LinkOut - more resources
Full Text Sources
Other Literature Sources
Molecular Biology Databases