Lysine demethylases KDM6A and UTY: The X and Y of histone demethylation
- PMID: 31097364
- DOI: 10.1016/j.ymgme.2019.04.012
Lysine demethylases KDM6A and UTY: The X and Y of histone demethylation
Abstract
Histone demethylases remove transcriptional repressive marks from histones in the nucleus. KDM6A (also known as UTX) is a lysine demethylase which acts on the trimethylated lysine at position 27 in histone 3. The KDM6A gene is located on the X chromosome but escapes X inactivation even though it is not located in the pseudoautosomal region. There is a homologue of KDM6A on the Y chromosome, known as UTY. UTY was thought to have lost its demethylase activity and to represent a non-functional remnant of the ancestral KDM6A gene. However, results with knockout mice suggest that the gene is expressed and the protein performs some function within the cell. Female mice with homozygous deletion of Kdm6a do not survive, but hemizygous males are viable, attributed to the presence of the Uty gene. KDM6A is mutated in the human condition Kabuki syndrome type 2 (OMIM 300867) and in many cases of cancer. The amino acid sequence of KDM6A has been conserved across animal phyla, although it is only found on the X chromosome in eutherian mammals. In this review, we reanalyse existing data from various sources (protein sequence comparison, evolutionary genetics, transcription factor binding and gene expression analysis) to determine the function, expression and evolution of KDM6A and UTY and show that UTY has a functional role similar to KDM6A in metabolism and development.
Keywords: Histone modification; KDM6A; Lysine demethylases; UTY; X chromosome; Y chromosome.
Copyright © 2019 Elsevier Inc. All rights reserved.
Similar articles
-
UTX and UTY demonstrate histone demethylase-independent function in mouse embryonic development.PLoS Genet. 2012 Sep;8(9):e1002964. doi: 10.1371/journal.pgen.1002964. Epub 2012 Sep 27. PLoS Genet. 2012. PMID: 23028370 Free PMC article.
-
AZFa candidate gene UTY and its X homologue UTX are expressed in human germ cells.Reprod Fertil. 2021 Jun 7;2(2):151-160. doi: 10.1530/RAF-20-0049. eCollection 2021 Apr. Reprod Fertil. 2021. PMID: 35128450 Free PMC article.
-
Target sequencing and CRISPR/Cas editing reveal simultaneous loss of UTX and UTY in urothelial bladder cancer.Oncotarget. 2016 Sep 27;7(39):63252-63260. doi: 10.18632/oncotarget.11207. Oncotarget. 2016. PMID: 27533081 Free PMC article.
-
Lysine Demethylase KDM6A in Differentiation, Development, and Cancer.Mol Cell Biol. 2020 Sep 28;40(20):e00341-20. doi: 10.1128/MCB.00341-20. Print 2020 Sep 28. Mol Cell Biol. 2020. PMID: 32817139 Free PMC article. Review.
-
The cancer driver genes IDH1/2, JARID1C/ KDM5C, and UTX/ KDM6A: crosstalk between histone demethylation and hypoxic reprogramming in cancer metabolism.Exp Mol Med. 2019 Jun 20;51(6):1-17. doi: 10.1038/s12276-019-0230-6. Exp Mol Med. 2019. PMID: 31221981 Free PMC article. Review.
Cited by
-
Microdeletions and vertical transmission of the Y-chromosome azoospermia factor region.Asian J Androl. 2023 Jan-Feb;25(1):5-12. doi: 10.4103/aja2021130. Asian J Androl. 2023. PMID: 35259786 Free PMC article. Review.
-
Depletion of Demethylase KDM6 Enhances Early Neuroectoderm Commitment of Human PSCs.Front Cell Dev Biol. 2021 Sep 8;9:702462. doi: 10.3389/fcell.2021.702462. eCollection 2021. Front Cell Dev Biol. 2021. PMID: 34568320 Free PMC article.
-
Molecular mechanisms of Y chromosome loss and UTY gene activity.Future Sci OA. 2024 May 15;10(1):2340838. doi: 10.2144/fsoa-2024-0031. eCollection 2024. Future Sci OA. 2024. PMID: 38817386 Free PMC article. No abstract available.
-
KDM6A-SND1 interaction maintains genomic stability by protecting the nascent DNA and contributes to cancer chemoresistance.Nucleic Acids Res. 2024 Jul 22;52(13):7665-7686. doi: 10.1093/nar/gkae487. Nucleic Acids Res. 2024. PMID: 38850159 Free PMC article.
-
EGFR transcriptionally upregulates UTX via STAT3 in non-small cell lung cancer.J Cancer Res Clin Oncol. 2022 Feb;148(2):309-319. doi: 10.1007/s00432-021-03800-6. Epub 2021 Oct 18. J Cancer Res Clin Oncol. 2022. PMID: 34661759 Free PMC article.
Publication types
MeSH terms
Substances
Grants and funding
LinkOut - more resources
Full Text Sources
Molecular Biology Databases