Molecular Mechanisms of Synaptic Vesicle Priming by Munc13 and Munc18

doi:10.1016/j.neuron.2017.07.004

. 2017 Aug 2;95(3):591-607.e10.

doi: 10.1016/j.neuron.2017.07.004.

Molecular Mechanisms of Synaptic Vesicle Priming by Munc13 and Munc18

Affiliations

¹ Department of Molecular and Cellular Physiology, Stanford University, Stanford, CA 94305, USA; Department of Neurology and Neurological Sciences, Stanford University, Stanford, CA 94305, USA; Department of Structural Biology, Stanford University, Stanford, CA 94305, USA; Department of Photon Science, Stanford University, Stanford, CA 94305, USA; Howard Hughes Medical Institute, Stanford University, Stanford, CA 94305, USA.
² Department of Molecular Neurobiology, Max Planck Institute for Experimental Medicine, 37075 Göttingen, Germany.
³ Department of Molecular and Cellular Physiology, Stanford University, Stanford, CA 94305, USA; Department of Neurology and Neurological Sciences, Stanford University, Stanford, CA 94305, USA; Department of Structural Biology, Stanford University, Stanford, CA 94305, USA; Department of Photon Science, Stanford University, Stanford, CA 94305, USA; Howard Hughes Medical Institute, Stanford University, Stanford, CA 94305, USA. Electronic address: brunger@stanford.edu.

PMID: 28772123
PMCID: PMC5747255
DOI: 10.1016/j.neuron.2017.07.004

Molecular Mechanisms of Synaptic Vesicle Priming by Munc13 and Munc18

Ying Lai et al. Neuron. 2017.

. 2017 Aug 2;95(3):591-607.e10.

doi: 10.1016/j.neuron.2017.07.004.

Authors

Affiliations

¹ Department of Molecular and Cellular Physiology, Stanford University, Stanford, CA 94305, USA; Department of Neurology and Neurological Sciences, Stanford University, Stanford, CA 94305, USA; Department of Structural Biology, Stanford University, Stanford, CA 94305, USA; Department of Photon Science, Stanford University, Stanford, CA 94305, USA; Howard Hughes Medical Institute, Stanford University, Stanford, CA 94305, USA.
² Department of Molecular Neurobiology, Max Planck Institute for Experimental Medicine, 37075 Göttingen, Germany.
³ Department of Molecular and Cellular Physiology, Stanford University, Stanford, CA 94305, USA; Department of Neurology and Neurological Sciences, Stanford University, Stanford, CA 94305, USA; Department of Structural Biology, Stanford University, Stanford, CA 94305, USA; Department of Photon Science, Stanford University, Stanford, CA 94305, USA; Howard Hughes Medical Institute, Stanford University, Stanford, CA 94305, USA. Electronic address: brunger@stanford.edu.

PMID: 28772123
PMCID: PMC5747255
DOI: 10.1016/j.neuron.2017.07.004

Abstract

Munc13 catalyzes the transit of syntaxin from a closed complex with Munc18 into the ternary SNARE complex. Here we report a new function of Munc13, independent of Munc18: it promotes the proper syntaxin/synaptobrevin subconfiguration during assembly of the ternary SNARE complex. In cooperation with Munc18, Munc13 additionally ensures the proper syntaxin/SNAP-25 subconfiguration. In a reconstituted fusion assay with SNAREs, complexin, and synaptotagmin, inclusion of both Munc13 and Munc18 quadruples the Ca²⁺-triggered amplitude and achieves Ca²⁺ sensitivity at near-physiological concentrations. In Munc13-1/2 double-knockout neurons, expression of a constitutively open mutant of syntaxin could only minimally restore neurotransmitter release relative to Munc13-1 rescue. Together, the physiological functions of Munc13 may be related to regulation of proper SNARE complex assembly.

Keywords: Munc13; Munc18; complexin; neuronal SNAREs; neurotransmitter release; plasticity; priming; synaptotagmin.

PubMed Disclaimer

Figures

**Figure 1. The MUN domain alone promotes the proper syntaxin-1A / synaptobrevin-2 subconfiguration, but not the syntaxin-1A / SNAP-25A subconfiguration**
(A, B, G) The syntaxin-1A (SX) / synaptobrevin-2 (SB) and the syntaxin-1A / SNAP-25A (S25) subconfigurations of the ternary SNARE complex were probed by single molecule experiments. The yellow dots and the asterisks (*) indicate fluorescently labeled residues. The cytoplasmic domain of SX was tethered on a PEG-passivated microscope slide via streptavidin-biotin linkage and labeled with Alexa 647 at residue 249. The cytoplasmic domain of SB was labeled with Alexa 555 at residue 82 and S25 was labeled with Alexa 555 at residue 76. The thin arrows represent parallel or antiparallel SX / SB (A, B) or SX / S25 (G) subconfigurations. (A, B) Beginning with surface-tethered SX, the binary complex with S25 was first formed, and then SB, was added in the absence (A) or in the presence (B) of the MUN domain at the specified concentration or BSA control. (G) Beginning with surface-tethered SX, the ternary SNARE complex was formed by adding S25 and SB at the same time in the presence of the MUN domain at the specified concentration or BSA control. (C, H) Mean counts from three fields of view ± SD (Table S1) of SB (C) or S25 (H) incorporation into the ternary SNARE complex in presence of the MUN domain at the specified concentrations or BSA control. (D, I) Representative fluorescence intensity time traces of properly (left panels) and improperly (right panels) assembled SNARE complexes that were formed starting from surface-tethered SX / S25 complex (D) or from surface-tethered SX molecules (I) in the absence of the MUN domain. (E, J) smFRET efficiency histograms using labeled SB (E), or S25 (J). (F, K) Percent of properly assembled SX / SB (F), or SX / S25 (K) subconfigurations. Shown are means ± SD for the two subsets of an equal partition of the data (Table S2).

**Figure 2. The MUN domain improves the efficiency of Ca²⁺-triggered fusion**
(A) Single vesicle content mixing assay. PM: plasma membrane mimic vesicles with reconstituted syntaxin-1A and SNAP-25A; SV: synaptic vesicle mimic with reconstituted synaptobrevin-2 and synaptotagmin-1. After SV-PM vesicle association, vesicle pairs either undergo Ca²⁺-independent fusion or remain associated until fusion is triggered by Ca²⁺ addition. The MUN domain is only present during the specified stages. “0 μM MUN” refers to the absence of the MUN domain in all stages. In protocol “Pre” the MUN domain is only present before and during SV-PM vesicle association. In protocol “Post” the MUN domain is present only after SV-PM vesicle association. (B–E) The bar graphs show the effects of MUN domain on the average probability of Ca²⁺-independent fusion events per second (B), the amplitude of the first 1-sec time bin upon 500 μM Ca²⁺-injection (C), the ratio of the Ca²⁺-triggered amplitude to the average probably of Ca²⁺-independent fusion per second (D), and the decay rate (1/τ) of the Ca²⁺-triggered fusion histogram (E). The fusion probabilities and amplitudes were normalized to the number of analyzed SV-PM vesicle pairs (Table S3). Individual histograms are in Figure S2. Panels B–D show means ± SD for multiple independent repeat experiments (Table S33). (E) Decay constants and error estimates computed from the covariance matrix upon fitting the corresponding histograms with a single exponential decay function using the Levenberg-Marquardt algorithm. * p < 0.05, ** p < 0.01 by Student’s t-test, compared to the experiment without the MUN domain.

**Figure 3. The C1C2BMUN and C1C2BMUNC2C fragments improve the efficiency of Ca²⁺-triggered fusion**
(A) The experimental scheme is identical to that shown in Figure 2A, protocol “all”, except that the C1C2BMUN or the C1C2BMUNC2C fragment is used instead of the MUN domain. (B–E) The bar graphs show the effects of the C1C2BMUN or the C1C2BMUNC2C fragment on the average probability of Ca²⁺-independent fusion events per second (B), the amplitude of the first 1-sec time bin upon Ca²⁺-injection (C), the ratio of the Ca²⁺-triggered amplitude to the average probably of Ca²⁺-independent fusion per second (D), and the decay rate (1/τ) of the histogram upon Ca²⁺-injection (E). (F–H) Ca²⁺ concentration dependence of triggered fusion in the presence of 500 nM C1C2BMUN fragment. Shown are the amplitude of the first 1-sec time bin upon 500 μM Ca²⁺-injection (F), the ratio of the Ca²⁺-triggered amplitude and the average probably of Ca²⁺-independent fusion per second (G). F and G were fit to Hill functions yielding the Ca²⁺ concentration at half occupation K_d and the Hill coefficient n. (H) decay rate (1/τ) of fusion histograms as a function of Ca²⁺. The fusion probabilities and amplitudes were normalized to the number of analyzed SV-PM vesicle pairs (Table S4). Individual histograms are in Figure S2. Panels B–D and F–G show means ± SD (Table S4). Panels E and H show decay constants and error estimates computed from the covariance matrix upon fitting the corresponding histograms with a single exponential decay function using the Levenberg-Marquardt algorithm. * p < 0.05, ** p < 0.01 by Student’s t-test, compared to the experiment without the C1C2BMUN fragment.

**Figure 4. Munc13-1 and Munc18-1 promote proper assembly of the ternary SNARE complex**
(A) The configurations of the ternary SNARE complex were probed by single molecule experiments. The cytoplasmic domain of syntaxin-1A (SX) was tethered on a PEG-passivated microscope slide via streptavidin-biotin linkage. Munc18-1 was added to assemble the SX / Munc18-1 complex. SNAP-25A (S25), the cytoplasmic domain of synaptobrevin-2 (SB) were then added in the presence of the MUN domain at the specified concentration or BSA control. The yellow dots and the asterisks (*) indicate the fluorescently labeled residues. The thin arrows represent parallel SX / SB (A) or SX / S25 (E) subconfigurations. The labeling sites are SX residue 249, SB residue 82, and S25 residue 76. (B) Beginning with surface tethered SX / Munc18-1 complex, SB incorporation into the ternary SNARE complex was measured by counting the number of labeled (Alexa 555) SB molecules in presence of unlabeled S25 and the MUN domain at the specified concentrations or BSA control. (C) smFRET efficiency histograms for labels attached to SB (Alexa 555) and SX (Alexa 647) in the presence MUN at the specified concentrations. (D) Percent of properly assembled ternary SNARE subconfigurations. (E–H) Similar to panels (A–D), starting from surface tethered SX / Munc18-1 complex and forming ternary SNARE complex in the presence of unlabeled SB, labeled (Alexa 555) S25, and the MUN domain at the specified concentration or BSA control. Panels B, F show means of the counts from three fields of view ± SD; panels D, H show means ± SD for the two subsets of an equal partition of the data (Tables S1 and S2).

**Figure 5. Formation of syntaxin-1A / Munc18-1 complex starting from syntaxin-1A / SNAP-25A complex**
smFRET experiments starting from surface-tethered cytoplasmic domain of syntaxin-1A (SX) alone (A) or SX / SNAP-25A (S25) complex (B). SX / S25 or SX / Munc18-1 complexes were formed by incubating S25 or Munc18-1 to surface-tethered SX, respectively. The yellow stars indicate residues that are used for labeling with fluorescent dyes. To form SX / Munc18-1 complex starting from SX / S25 complex, 1 μM Munc18-1 was added in presence of the disassembly factors (1 μM NSF, 10 μM αSNAP, 1 mM ATP, 1 mM Mg²⁺). (C) Representative fluorescence intensity time traces for smFRET efficiency measurements on surface-tethered SX (top panel), in complex with S25 (middle panel) or Munc18-1 (bottom panel). (D) smFRET efficiency histograms of surface-tethered SX (black line), in SX / S25 complex (green line), or SX / Munc18-1 complex (red line). (E) smFRET efficiency histograms starting from SX / S25 complex (green line) in the presence (red line) and absence (blue line) of 1 μM Munc18-1. (F) smFRET efficiency histograms starting from SX / S25 complex (green line) in presence of 1 μM Munc18-1 in the presence (red line) or absence (cyan line) of 1 mM Mg²⁺. (G) The bar chart shows means ± SD of the percent closed state for the two subsets of an equal partition of the data (Table S5). In each smFRET histogram, the red arrow indicates the closed state of SX.

**Figure 6. Fusion experiments with complete reconstitution**
(A) Single vesicle content mixing assay with complete reconstitution. PM and SV defined in Figure 2; SM: vesicles with reconstituted syntaxin-1A / Munc18-1 complex. The C1C2BMUN fragment was added after formation of the SM vesicles and during all subsequent stages. (B) Representative histograms for triggered fusion at 50 μM, 500 μM Ca²⁺. Inset, triggered fusion without C1C2BMUN (note that without C1C2BMUN, ternary SNARE complex cannot form, thus little fusion is observed). (C–F) The bar graphs show the effects of C1C2BMUN fragment on the average probability of Ca²⁺-independent fusion events per second (C), the amplitude of the first 1-sec time bin upon 500 μM Ca²⁺-injection (D), the ratio of the Ca²⁺-triggered amplitude to the average probably of Ca²⁺-independent fusion per second (E), and the decay rate (1/τ) of the histogram upon Ca²⁺-injection (F). (G–I) Ca²⁺ concentration dependence of triggered fusion in the presence of 500 nM C1C2BMUN fragment. Shown are the amplitude of the first 1-sec time bin upon Ca²⁺-injection (G), the ratio of the Ca²⁺-triggered amplitude to the average probably of Ca²⁺-independent fusion per second (H), and the decay rate (1/τ) of the histogram upon Ca²⁺-injection (I) as a function of Ca²⁺-concentration. Hill functions were fit yielding the Ca²⁺ concentration at half occupation K_d and the Hill coefficient n. Individual histograms are in Figure S2. Panels C–E and G–H show means ± SD for multiple independent repeat experiments (Table S7). Panels F and I show decay constants and error estimates computed from the covariance matrix upon fitting the corresponding histograms with a single exponential decay function using the Levenberg-Marquardt algorithm. * p < 0.05, ** p < 0.01 by Student’s t-test.

**Figure 7. Syntaxin-1A^LE mutant overexpression in Munc13-1/2 double-knockout neurons**
Experiments in hippocampal autaptic neurons cultured from Munc13-1/2 double-knockout mice. Neurons were infected with recombinant Semliki Forest virus expressing either wild-type Munc13-1 or syntaxin-1A^LE mutant. (A) Western blot using an anti-Munc13-1 antibody showed the level of expression of Munc13-1 in Munc13-1/2 double-knockout hippocampal neurons infected with Semliki Forest virus expressing GFP only, or Munc13-1 (upper panel). Tubulin was used as a loading control (bottom panel). (B) Western blot using an anti-syntaxin-1A antibody showed the level of expression of syntaxin-1A/syntaxin-1A^LE in Munc13-1/2 double-knockout hippocampal neurons expressing GFP only syntaxin-1A^LE (upper panel). Actin was used as a loading control (C) Relative quantification of syntaxin-1A protein amounts in Munc13-1/2 double-knockout hippocampal neurons. Signals were normalized to the level of endogenous syntaxin-1A in GFP-only overexpressing neurons (white bar; 1.0 + 0.1, n=4). Overexpression of syntaxin-1A^LE increase the signal 1.7 ± 0.2 fold (black bar; n=3, p=0.037 (Student’s t-test)). (D) EPSCs were recorded in whole-cell patch-clamp mode. Representative traces of EPSCs (top) and postsynaptic currents evoked by 0.5 M sucrose (bottom). (E) Average values of EPSC amplitudes of the first three stimuli of a 0.2 Hz series of stimuli in neurons expressing Munc13-1 (black; from 74 neurons from 5 mice) and syntaxin-1A^LE mutant (grey; from 50 neurons from 5 mice) that showed a response out of 353 that expressed GFP). (F) Apparent readily releasable vesicle pool (RRP) size calculated by the integral of the sucrose response over 4 seconds in Munc13-1 (black; from 18 neurons from 3 mice) and syntaxin-1A^LE mutant neurons (grey; from 25 neurons from 3 mice). (G) Release probability calculated as the ratio of the EPSC amplitude to that of the RRP in Munc13-1 (black; from 18 neurons from 3 mice) and syntaxin-1A^LE mutant neurons (grey; from 25 neurons from 3 mice). (H) Normalized EPSC amplitudes in Munc13-1 wild type (black) and syntaxin-1A^LE mutant neurons (grey) during 0.2 Hz stimulation. (I) Normalized EPSC amplitudes during 10 Hz stimulation. (J) Representative traces of miniature EPSCs (mEPSC) in neurons with overexpressed Munc13-1 (top) or syntaxin-1A^LE mutant (bottom) in the presence of 200 nM TTX. (K) Average mEPSC amplitudes of Munc13-1 (black; from 11 neurons from 1 mouse) and syntaxin-1A^LE mutant neurons (grey; from 3 neurons from 1 mouse). (L) Average mEPSC frequencies of Munc13-1 (black) and syntaxin-1A^LE mutant neurons (grey). (M) Example traces of neurons in the presence of 100 μM calcimycin. The vertical lines are stimulation artifacts resulting from intermittent monitoring of evoked EPSCs. (N) EPSC charge induced by calcimycin in Munc13-1 (from 21 neurons from 3 mice) and syntaxin-1A^LE mutant neurons (from 16 neurons from 4 mice). Note * p<0.05, ** p<0.01, and *** p < 0.001.

**Figure 8. Model of concerted Munc18-1 / Munc13-1 action to properly assemble ternary SNARE complex**
Model of the combined effect of Munc13-1 and Munc18-1 on Ca²⁺-triggered fusion. (A) Munc13-1 and Munc18-1 cooperate to produce proper *trans* ternary SNARE complex. (B) Without Munc13-1 and Munc18-1, *trans* ternary SNARE complex assembly is error prone resulting in much reduced Ca²⁺-triggered fusion probability.

See this image and copyright information in PMC

Cited by

Control of Munc13-1 Activity by Autoinhibitory Interactions Involving the Variable N-terminal Region.
Xu J, Esser V, Gołębiowska-Mendroch K, Bolembach AA, Rizo J. Xu J, et al. bioRxiv [Preprint]. 2024 Jan 25:2024.01.24.577102. doi: 10.1101/2024.01.24.577102. bioRxiv. 2024. Update in: J Mol Biol. 2024 Apr 15;436(8):168502. doi: 10.1016/j.jmb.2024.168502. PMID: 38328168 Free PMC article. Updated. Preprint.
CaV1 and CaV2 calcium channels mediate the release of distinct pools of synaptic vesicles.
Mueller BD, Merrill SA, Watanabe S, Liu P, Niu L, Singh A, Maldonado-Catala P, Cherry A, Rich MS, Silva M, Maricq AV, Wang ZW, Jorgensen EM. Mueller BD, et al. Elife. 2023 Feb 23;12:e81407. doi: 10.7554/eLife.81407. Elife. 2023. PMID: 36820519 Free PMC article.
A sequential two-step priming scheme reproduces diversity in synaptic strength and short-term plasticity.
Lin KH, Taschenberger H, Neher E. Lin KH, et al. Proc Natl Acad Sci U S A. 2022 Aug 23;119(34):e2207987119. doi: 10.1073/pnas.2207987119. Epub 2022 Aug 15. Proc Natl Acad Sci U S A. 2022. PMID: 35969787 Free PMC article.
On the difficulties of characterizing weak protein interactions that are critical for neurotransmitter release.
Rizo J, David G, Fealey ME, Jaczynska K. Rizo J, et al. FEBS Open Bio. 2022 Nov;12(11):1912-1938. doi: 10.1002/2211-5463.13473. Epub 2022 Sep 2. FEBS Open Bio. 2022. PMID: 35986639 Free PMC article. Review.
In Vivo Analysis of a Gain-of-Function Mutation Confirms Unc18/Munc18's Role in Priming.
Parra LA. Parra LA. J Neurosci. 2018 Jan 31;38(5):1055-1057. doi: 10.1523/JNEUROSCI.3068-17.2017. J Neurosci. 2018. PMID: 29386300 Free PMC article. Review. No abstract available.

See all "Cited by" articles

References

1. Aravamudan B, Fergestad T, Davis WS, Rodesch CK, Broadie K. Drosophila UNC-13 is essential for synaptic transmission. Nat Neurosci. 1999;2:965–971. - PubMed
1. Ashery U, Betz A, Xu T, Brose N, Rettig J. An efficient method for infection of adrenal chromaffin cells using the Semliki Forest virus gene expression system. Eur J Cell Biol. 1999;78:525–532. - PubMed
1. Augustin I, Rosenmund C, Südhof TC, Brose N. Munc13-1 is essential for fusion competence of glutamatergic synaptic vesicles. Nature. 1999;400:457–461. - PubMed
1. Baker RW, Jeffrey PD, Zick M, Phillips BP, Wickner WT, Hughson FM. A direct role for the Sec1/Munc18-family protein Vps33 as a template for SNARE assembly. Science (80– ) 2015;349:1111–1114. - PMC - PubMed
1. Basu J, Shen N, Dulubova I, Lu J, Guan R, Guryev O, Grishin NV, Rosenmund C, Rizo J. A minimal domain responsible for Munc13 activity. Nat Struct Mol Biol. 2005;12:1017–1018. - PubMed

MeSH terms

Actions
Actions
Actions
Actions
Actions
Actions
Actions
Actions
Actions
Actions
Actions
Actions
Actions
Actions

Substances

Actions
Actions
Actions
Actions
Actions
Actions
Actions

Grants and funding

LinkOut - more resources

Full Text Sources
Other Literature Sources
- H1 Connect
- scite Smart Citations
Molecular Biology Databases
- Mouse Genome Informatics (MGI)
Research Materials
- Addgene Non-profit plasmid repository
Miscellaneous
- NCI CPTAC Assay Portal
- SciCrunch

[1] Aravamudan B, Fergestad T, Davis WS, Rodesch CK, Broadie K. Drosophila UNC-13 is essential for synaptic transmission. Nat Neurosci. 1999;2:965–971. - PubMed

[2] Aravamudan B, Fergestad T, Davis WS, Rodesch CK, Broadie K. Drosophila UNC-13 is essential for synaptic transmission. Nat Neurosci. 1999;2:965–971. - PubMed

[3] Ashery U, Betz A, Xu T, Brose N, Rettig J. An efficient method for infection of adrenal chromaffin cells using the Semliki Forest virus gene expression system. Eur J Cell Biol. 1999;78:525–532. - PubMed

[4] Ashery U, Betz A, Xu T, Brose N, Rettig J. An efficient method for infection of adrenal chromaffin cells using the Semliki Forest virus gene expression system. Eur J Cell Biol. 1999;78:525–532. - PubMed

[5] Augustin I, Rosenmund C, Südhof TC, Brose N. Munc13-1 is essential for fusion competence of glutamatergic synaptic vesicles. Nature. 1999;400:457–461. - PubMed

[6] Augustin I, Rosenmund C, Südhof TC, Brose N. Munc13-1 is essential for fusion competence of glutamatergic synaptic vesicles. Nature. 1999;400:457–461. - PubMed

[7] Baker RW, Jeffrey PD, Zick M, Phillips BP, Wickner WT, Hughson FM. A direct role for the Sec1/Munc18-family protein Vps33 as a template for SNARE assembly. Science (80– ) 2015;349:1111–1114. - PMC - PubMed

[8] Baker RW, Jeffrey PD, Zick M, Phillips BP, Wickner WT, Hughson FM. A direct role for the Sec1/Munc18-family protein Vps33 as a template for SNARE assembly. Science (80– ) 2015;349:1111–1114. - PMC - PubMed

[9] Basu J, Shen N, Dulubova I, Lu J, Guan R, Guryev O, Grishin NV, Rosenmund C, Rizo J. A minimal domain responsible for Munc13 activity. Nat Struct Mol Biol. 2005;12:1017–1018. - PubMed

[10] Basu J, Shen N, Dulubova I, Lu J, Guan R, Guryev O, Grishin NV, Rosenmund C, Rizo J. A minimal domain responsible for Munc13 activity. Nat Struct Mol Biol. 2005;12:1017–1018. - PubMed

Save citation to file

Email citation

Add to Collections

Add to My Bibliography

Your saved search

Create a file for external citation management software

Your RSS Feed

Molecular Mechanisms of Synaptic Vesicle Priming by Munc13 and Munc18

Affiliations

Molecular Mechanisms of Synaptic Vesicle Priming by Munc13 and Munc18

Authors

Affiliations

Abstract

Figures

Similar articles

Cited by

References

MeSH terms

Substances

Grants and funding

LinkOut - more resources

Full Text Sources

Other Literature Sources

Molecular Biology Databases

Research Materials

Miscellaneous

Abstract

Figures

Similar articles

Cited by

References

MeSH terms

Substances

Related information

Grants and funding

LinkOut - more resources

Full Text Sources

Other Literature Sources

Molecular Biology Databases

Research Materials

Miscellaneous