Programmable DNA cleavage in vitro by Cas9
- PMID: 24256227
- DOI: 10.1042/BST20130164
Programmable DNA cleavage in vitro by Cas9
Abstract
The ternary Cas9-crRNA-tracrRNA complex (Cas9t) of the Type II CRISPR (clustered regularly interspaced short palindromic repeats)-Cas (CRISPR-associated) system functions as an Mg2+-dependent RNA-directed DNA endonuclease that locates its DNA target guided by the crRNA (CRISPR RNA) in the tracrRNA-crRNA structure and introduces a double-strand break at a specific site in DNA. The simple modular organization of Cas9t, where specificity for the DNA target is encoded by a small crRNA and the cleavage reaction is executed by the Cas9 endonuclease, provides a versatile platform for the engineering of universal RNA-directed DNA endonucleases. By altering the crRNA sequence within the Cas9t complex, programmable endonucleases can be designed for both in vitro and in vivo applications. Cas9t has been recently employed as a gene-editing tool in various eukaryotic cell types. Using Streptococcus thermophilus Cas9t as a model system, we demonstrate the feasibility of Cas9t as a programmable molecular tool for in vitro DNA manipulations.
Similar articles
-
crRNA and tracrRNA guide Cas9-mediated DNA interference in Streptococcus thermophilus.RNA Biol. 2013 May;10(5):841-51. doi: 10.4161/rna.24203. Epub 2013 Mar 27. RNA Biol. 2013. PMID: 23535272 Free PMC article.
-
RNA-dependent DNA endonuclease Cas9 of the CRISPR system: Holy Grail of genome editing?Trends Microbiol. 2013 Nov;21(11):562-7. doi: 10.1016/j.tim.2013.09.001. Epub 2013 Oct 1. Trends Microbiol. 2013. PMID: 24095303
-
CRISPR/Cas9 for genome editing: progress, implications and challenges.Hum Mol Genet. 2014 Sep 15;23(R1):R40-6. doi: 10.1093/hmg/ddu125. Epub 2014 Mar 20. Hum Mol Genet. 2014. PMID: 24651067 Review.
-
Cas9-crRNA ribonucleoprotein complex mediates specific DNA cleavage for adaptive immunity in bacteria.Proc Natl Acad Sci U S A. 2012 Sep 25;109(39):E2579-86. doi: 10.1073/pnas.1208507109. Epub 2012 Sep 4. Proc Natl Acad Sci U S A. 2012. PMID: 22949671 Free PMC article.
-
[Progress of genome engineering technology via clustered regularly interspaced short palindromic repeats--a review].Wei Sheng Wu Xue Bao. 2013 Oct 4;53(10):1025-30. Wei Sheng Wu Xue Bao. 2013. PMID: 24409757 Review. Chinese.
Cited by
-
Multiplexed CRISPR/Cas9- and TAR-Mediated Promoter Engineering of Natural Product Biosynthetic Gene Clusters in Yeast.ACS Synth Biol. 2016 Sep 16;5(9):1002-10. doi: 10.1021/acssynbio.6b00080. Epub 2016 Jun 10. ACS Synth Biol. 2016. PMID: 27197732 Free PMC article.
-
Cas9-Assisted Targeting of CHromosome segments CATCH enables one-step targeted cloning of large gene clusters.Nat Commun. 2015 Sep 1;6:8101. doi: 10.1038/ncomms9101. Nat Commun. 2015. PMID: 26323354 Free PMC article.
-
RNA-directed gene editing specifically eradicates latent and prevents new HIV-1 infection.Proc Natl Acad Sci U S A. 2014 Aug 5;111(31):11461-6. doi: 10.1073/pnas.1405186111. Epub 2014 Jul 21. Proc Natl Acad Sci U S A. 2014. PMID: 25049410 Free PMC article.
-
DNA targeting by the type I-G and type I-A CRISPR-Cas systems of Pyrococcus furiosus.Nucleic Acids Res. 2015 Dec 2;43(21):10353-63. doi: 10.1093/nar/gkv1140. Epub 2015 Oct 30. Nucleic Acids Res. 2015. PMID: 26519471 Free PMC article.
-
Targeted gene editing by transfection of in vitro reconstituted Streptococcus thermophilus Cas9 nuclease complex.RNA Biol. 2015;12(1):1-4. doi: 10.1080/15476286.2015.1017209. RNA Biol. 2015. PMID: 25826410 Free PMC article. No abstract available.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources