Design, synthesis, and kinetic characterization of protein N-terminal acetyltransferase inhibitors
- PMID: 23557624
- DOI: 10.1021/cb400136s
Design, synthesis, and kinetic characterization of protein N-terminal acetyltransferase inhibitors
Abstract
The N-termini of 80-90% of human proteins are acetylated by the N-terminal acetyltransferases (NATs), NatA-NatF. The major NAT complex, NatA, and particularly the catalytic subunit hNaa10 (ARD1) has been implicated in cancer development. For example, knockdown of hNaa10 results in cancer cell death and the arrest of cell proliferation. It also sensitized cancer cells to drug-induced cytotoxicity. Human NatE has a distinct substrate specificity and is essential for normal chromosome segregation. Thus, NAT inhibitors may potentially be valuable anticancer therapeutics, either directly or as adjuvants. Herein, we report the design and synthesis of the first inhibitors targeting these enzymes. Using the substrate specificity of the enzymes as a guide, we synthesized three bisubstrate analogues that potently and selectively inhibit the NatA complex (CoA-Ac-SES4; IC50 = 15.1 μM), hNaa10, the catalytic subunit of NatA (CoA-Ac-EEE4; Ki = 1.6 μM), and NatE/hNaa50 (CoA-Ac-MLG7; Ki* = 8 nM); CoA-Ac-EEE4 is a reversible competitive inhibitor of hNaa10, and CoA-Ac-MLG7 is a slow tight binding inhibitor of hNaa50. Our demonstration that it is possible to develop NAT selective inhibitors should assist future efforts to develop NAT inhibitors with more drug-like properties that can be used to chemically interrogate in vivo NAT function.
Similar articles
-
N-terminal acetylome analysis reveals the specificity of Naa50 (Nat5) and suggests a kinetic competition between N-terminal acetyltransferases and methionine aminopeptidases.Proteomics. 2015 Jul;15(14):2436-46. doi: 10.1002/pmic.201400575. Epub 2015 Jun 5. Proteomics. 2015. PMID: 25886145
-
Implications for the evolution of eukaryotic amino-terminal acetyltransferase (NAT) enzymes from the structure of an archaeal ortholog.Proc Natl Acad Sci U S A. 2013 Sep 3;110(36):14652-7. doi: 10.1073/pnas.1310365110. Epub 2013 Aug 19. Proc Natl Acad Sci U S A. 2013. PMID: 23959863 Free PMC article.
-
A novel human NatA Nalpha-terminal acetyltransferase complex: hNaa16p-hNaa10p (hNat2-hArd1).BMC Biochem. 2009 May 29;10:15. doi: 10.1186/1471-2091-10-15. BMC Biochem. 2009. PMID: 19480662 Free PMC article.
-
Protein N-terminal acetyltransferases in cancer.Oncogene. 2013 Jan 17;32(3):269-76. doi: 10.1038/onc.2012.82. Epub 2012 Mar 5. Oncogene. 2013. PMID: 22391571 Review.
-
The biological functions of Naa10 - From amino-terminal acetylation to human disease.Gene. 2015 Aug 10;567(2):103-31. doi: 10.1016/j.gene.2015.04.085. Epub 2015 May 16. Gene. 2015. PMID: 25987439 Free PMC article. Review.
Cited by
-
Lysine Acetyltransferases and Their Role in AR Signaling and Prostate Cancer.Front Endocrinol (Lausanne). 2022 Aug 17;13:886594. doi: 10.3389/fendo.2022.886594. eCollection 2022. Front Endocrinol (Lausanne). 2022. PMID: 36060957 Free PMC article. Review.
-
Depletion of histone N-terminal-acetyltransferase Naa40 induces p53-independent apoptosis in colorectal cancer cells via the mitochondrial pathway.Apoptosis. 2016 Mar;21(3):298-311. doi: 10.1007/s10495-015-1207-0. Apoptosis. 2016. PMID: 26666750 Free PMC article.
-
Naa50/San-dependent N-terminal acetylation of Scc1 is potentially important for sister chromatid cohesion.Sci Rep. 2016 Dec 20;6:39118. doi: 10.1038/srep39118. Sci Rep. 2016. PMID: 27996020 Free PMC article.
-
Protein N-Terminal Acetylation: Structural Basis, Mechanism, Versatility, and Regulation.Trends Biochem Sci. 2021 Jan;46(1):15-27. doi: 10.1016/j.tibs.2020.08.005. Epub 2020 Sep 8. Trends Biochem Sci. 2021. PMID: 32912665 Free PMC article. Review.
-
Biochemical evidence for relaxed substrate specificity of Nα-acetyltransferase (Rv3420c/rimI) of Mycobacterium tuberculosis.Sci Rep. 2016 Jun 29;6:28892. doi: 10.1038/srep28892. Sci Rep. 2016. PMID: 27353550 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources