Complete genome sequence of human respiratory syncytial virus genotype A with a 72-nucleotide duplication in the attachment protein G gene

doi:10.1128/JVI.02571-12

. 2012 Dec;86(24):13810-1.

doi: 10.1128/JVI.02571-12.

Complete genome sequence of human respiratory syncytial virus genotype A with a 72-nucleotide duplication in the attachment protein G gene

Wan-Ji Lee¹, You-jin Kim, Dae-Won Kim, Han Saem Lee, Ho Yeon Lee, Kisoon Kim

Affiliations

PMID: 23166231
PMCID: PMC3503102
DOI: 10.1128/JVI.02571-12

Complete genome sequence of human respiratory syncytial virus genotype A with a 72-nucleotide duplication in the attachment protein G gene

Wan-Ji Lee et al. J Virol. 2012 Dec.

. 2012 Dec;86(24):13810-1.

doi: 10.1128/JVI.02571-12.

Authors

Wan-Ji Lee¹, You-jin Kim, Dae-Won Kim, Han Saem Lee, Ho Yeon Lee, Kisoon Kim

Affiliation

¹ Division of Respiratory Viruses, Center for Infectious Disease, Korea National Institute of Health, Cheongwon-gun, Chungbuk-do, Republic of Korea.

PMID: 23166231
PMCID: PMC3503102
DOI: 10.1128/JVI.02571-12

Abstract

The complete genome sequence of human respiratory syncytial virus genotype A (HRSV-A) with a 72-nucleotide duplication in the C-terminal part of the attachment protein G gene was determined and analyzed. The genome was 15,277 bp in length, and 0.46 to 6.03% variations were identified at the nucleotide level compared with the previously reported complete genome of HRSV-A. Characterization of the genome will improve understanding of the diversity of the HRSV-A major antigens and enable an in-depth analysis of its genetics.

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References

1. Anderson LJ, Parker RA, Strikas RL. 1990. Association between respiratory syncytial virus outbreaks and lower respiratory tract deaths of infants and young children. J. Infect. Dis. 161:640–646 - PubMed
1. Eshaghi A, et al. 2012. Genetic variability of human respiratory syncytial virus a strains circulating in Ontario: a novel genotype with a 72 nucleotide G gene duplication. PLoS One 7:e32807 doi:10.1371/journal.pone.0032807 - DOI - PMC - PubMed
1. Kumaria R, Iyer LR, Hibberd ML, Simoes EA, Sugrue RJ. 2011. Whole genome characterization of non-tissue culture adapted HRSV strains in severely infected children. Virol. J. 8:372 doi:10.1186/1743-422X-8-372 - DOI - PMC - PubMed
1. Mufson MA, Orvell C, Rafnar B, Norrby E. 1985. Two distinct sub-types of human respiratory syncytial virus. J. Gen. Virol. 66(Pt 10):2111–2124 - PubMed
1. Rebuffo-Scheer C, et al. 2011. Whole genome sequencing and evolutionary analysis of human respiratory syncytial virus A and B from Milwaukee, WI 1998-2010. PLoS One 6:e25468 doi:10.1371/journal.pone.0025468 - DOI - PMC - PubMed

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[1] Anderson LJ, Parker RA, Strikas RL. 1990. Association between respiratory syncytial virus outbreaks and lower respiratory tract deaths of infants and young children. J. Infect. Dis. 161:640–646 - PubMed

[2] Anderson LJ, Parker RA, Strikas RL. 1990. Association between respiratory syncytial virus outbreaks and lower respiratory tract deaths of infants and young children. J. Infect. Dis. 161:640–646 - PubMed

[3] Eshaghi A, et al. 2012. Genetic variability of human respiratory syncytial virus a strains circulating in Ontario: a novel genotype with a 72 nucleotide G gene duplication. PLoS One 7:e32807 doi:10.1371/journal.pone.0032807 - DOI - PMC - PubMed

[4] Eshaghi A, et al. 2012. Genetic variability of human respiratory syncytial virus a strains circulating in Ontario: a novel genotype with a 72 nucleotide G gene duplication. PLoS One 7:e32807 doi:10.1371/journal.pone.0032807 - DOI - PMC - PubMed

[5] Kumaria R, Iyer LR, Hibberd ML, Simoes EA, Sugrue RJ. 2011. Whole genome characterization of non-tissue culture adapted HRSV strains in severely infected children. Virol. J. 8:372 doi:10.1186/1743-422X-8-372 - DOI - PMC - PubMed

[6] Kumaria R, Iyer LR, Hibberd ML, Simoes EA, Sugrue RJ. 2011. Whole genome characterization of non-tissue culture adapted HRSV strains in severely infected children. Virol. J. 8:372 doi:10.1186/1743-422X-8-372 - DOI - PMC - PubMed

[7] Mufson MA, Orvell C, Rafnar B, Norrby E. 1985. Two distinct sub-types of human respiratory syncytial virus. J. Gen. Virol. 66(Pt 10):2111–2124 - PubMed

[8] Mufson MA, Orvell C, Rafnar B, Norrby E. 1985. Two distinct sub-types of human respiratory syncytial virus. J. Gen. Virol. 66(Pt 10):2111–2124 - PubMed

[9] Rebuffo-Scheer C, et al. 2011. Whole genome sequencing and evolutionary analysis of human respiratory syncytial virus A and B from Milwaukee, WI 1998-2010. PLoS One 6:e25468 doi:10.1371/journal.pone.0025468 - DOI - PMC - PubMed

[10] Rebuffo-Scheer C, et al. 2011. Whole genome sequencing and evolutionary analysis of human respiratory syncytial virus A and B from Milwaukee, WI 1998-2010. PLoS One 6:e25468 doi:10.1371/journal.pone.0025468 - DOI - PMC - PubMed

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Complete genome sequence of human respiratory syncytial virus genotype A with a 72-nucleotide duplication in the attachment protein G gene

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Complete genome sequence of human respiratory syncytial virus genotype A with a 72-nucleotide duplication in the attachment protein G gene

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