Amplification of an ancestral mammalian L1 family of long interspersed repeated DNA occurred just before the murine radiation
- PMID: 2251288
- PMCID: PMC55190
- DOI: 10.1073/pnas.87.23.9481
Amplification of an ancestral mammalian L1 family of long interspersed repeated DNA occurred just before the murine radiation
Abstract
Each mammalian genus examined so far contains 50,000-100,000 members of an L1 (LINE 1) family of long interspersed repeated DNA elements. Current knowledge on the evolution of L1 families presents a paradox because, although L1 families have been in mammalian genomes since before the mammalian radiation approximately 80 million years ago, most members of the L1 families are only a few million years old. Accordingly it has been suggested either that the extensive amplification that characterizes present-day L1 families did not occur in the past or that old members were removed as new ones were generated. However, we show here that an ancestral rodent L1 family was extensively amplified approximately 10 million years ago and that the relics (approximately 60,000 copies) of this amplification have persisted in modern murine genomes (Old World rats and mice). This amplification occurred just before the divergence of modern murine genera from their common ancestor and identifies the murine node in the lineage of modern muroid rodents. Our results suggest that repeated amplification of L1 elements is a feature of the evolution of mammalian genomes and that ancestral amplification events could provide a useful tool for determining mammalian lineages.
Similar articles
-
The evolution of long interspersed repeated DNA (L1, LINE 1) as revealed by the analysis of an ancient rodent L1 DNA family.J Mol Evol. 1993 Jan;36(1):9-20. doi: 10.1007/BF02407302. J Mol Evol. 1993. PMID: 8433380
-
Amplification of the ancient murine Lx family of long interspersed repeated DNA occurred during the murine radiation.J Mol Evol. 1994 Jan;38(1):18-27. doi: 10.1007/BF00175491. J Mol Evol. 1994. PMID: 8151711
-
L1 (LINE-1) retrotransposable elements provide a "fossil" record of the phylogenetic history of murid rodents.Mol Biol Evol. 1995 Jan;12(1):73-82. doi: 10.1093/oxfordjournals.molbev.a040192. Mol Biol Evol. 1995. PMID: 7877498
-
Use of long sequence alignments to study the evolution and regulation of mammalian globin gene clusters.Mol Biol Evol. 1993 Jan;10(1):73-102. doi: 10.1093/oxfordjournals.molbev.a039991. Mol Biol Evol. 1993. PMID: 8383794 Review.
-
DNA "fossils" and phylogenetic analysis. Using L1 (LINE-1, long interspersed repeated) DNA to determine the evolutionary history of mammals.J Biol Chem. 1995 Oct 27;270(43):25301-4. doi: 10.1074/jbc.270.43.25301. J Biol Chem. 1995. PMID: 7592685 Review. No abstract available.
Cited by
-
The Structural, Functional and Evolutionary Impact of Transposable Elements in Eukaryotes.Genes (Basel). 2021 Jun 15;12(6):918. doi: 10.3390/genes12060918. Genes (Basel). 2021. PMID: 34203645 Free PMC article. Review.
-
The retroelement Lx9 puts a brake on the immune response to virus infection.Nature. 2022 Aug;608(7924):757-765. doi: 10.1038/s41586-022-05054-9. Epub 2022 Aug 10. Nature. 2022. PMID: 35948641
-
The evolution of long interspersed repeated DNA (L1, LINE 1) as revealed by the analysis of an ancient rodent L1 DNA family.J Mol Evol. 1993 Jan;36(1):9-20. doi: 10.1007/BF02407302. J Mol Evol. 1993. PMID: 8433380
-
LINEs and SINEs of primate evolution.Evol Anthropol. 2010 Nov 1;19(6):236-249. doi: 10.1002/evan.20283. Evol Anthropol. 2010. PMID: 25147443 Free PMC article. No abstract available.
-
Evolutionary conservation of the functional modularity of primate and murine LINE-1 elements.PLoS One. 2011 May 10;6(5):e19672. doi: 10.1371/journal.pone.0019672. PLoS One. 2011. PMID: 21572950 Free PMC article.
References
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources
Miscellaneous