RNA nucleotide methylation
- PMID: 21823225
- DOI: 10.1002/wrna.79
RNA nucleotide methylation
Abstract
Methylation of RNA occurs at a variety of atoms, nucleotides, sequences and tertiary structures. Strongly related to other posttranscriptional modifications, methylation of different RNA species includes tRNA, rRNA, mRNA, tmRNA, snRNA, snoRNA, miRNA, and viral RNA. Different catalytic strategies are employed for RNA methylation by a variety of RNA-methyltransferases which fall into four superfamilies. This review outlines the different functions of methyl groups in RNA, including biophysical, biochemical and metabolic stabilization of RNA, quality control, resistance to antibiotics, mRNA reading frame maintenance, deciphering of normal and altered genetic code, selenocysteine incorporation, tRNA aminoacylation, ribotoxins, splicing, intracellular trafficking, immune response, and others. Connections to other fields including gene regulation, DNA repair, stress response, and possibly histone acetylation and exocytosis are pointed out. WIREs RNA 2011 2 611-631 DOI: 10.1002/wrna.79 For further resources related to this article, please visit the WIREs website.
Copyright © 2011 John Wiley & Sons, Ltd.
Similar articles
-
RNA-methyltransferase TrmA is a dual-specific enzyme responsible for C5-methylation of uridine in both tmRNA and tRNA.RNA Biol. 2013 Apr;10(4):572-8. doi: 10.4161/rna.24327. Epub 2013 Apr 1. RNA Biol. 2013. PMID: 23603891 Free PMC article.
-
Substrate tRNA recognition mechanism of eubacterial tRNA (m1A58) methyltransferase (TrmI).J Biol Chem. 2015 Feb 27;290(9):5912-25. doi: 10.1074/jbc.M114.606038. Epub 2015 Jan 15. J Biol Chem. 2015. PMID: 25593312 Free PMC article.
-
TRMT2B is responsible for both tRNA and rRNA m5U-methylation in human mitochondria.RNA Biol. 2020 Apr;17(4):451-462. doi: 10.1080/15476286.2020.1712544. Epub 2020 Jan 17. RNA Biol. 2020. PMID: 31948311 Free PMC article.
-
Dynamic RNA modifications in posttranscriptional regulation.Mol Cell. 2014 Oct 2;56(1):5-12. doi: 10.1016/j.molcel.2014.09.001. Mol Cell. 2014. PMID: 25280100 Free PMC article. Review.
-
7-Methylguanosine Modifications in Transfer RNA (tRNA).Int J Mol Sci. 2018 Dec 17;19(12):4080. doi: 10.3390/ijms19124080. Int J Mol Sci. 2018. PMID: 30562954 Free PMC article. Review.
Cited by
-
Pmt1, a Dnmt2 homolog in Schizosaccharomyces pombe, mediates tRNA methylation in response to nutrient signaling.Nucleic Acids Res. 2012 Dec;40(22):11648-58. doi: 10.1093/nar/gks956. Epub 2012 Oct 15. Nucleic Acids Res. 2012. PMID: 23074192 Free PMC article.
-
N(6)-Methyladenosine: a conformational marker that regulates the substrate specificity of human demethylases FTO and ALKBH5.Sci Rep. 2016 May 9;6:25677. doi: 10.1038/srep25677. Sci Rep. 2016. PMID: 27156733 Free PMC article.
-
Target recognition, RNA methylation activity and transcriptional regulation of the Dictyostelium discoideum Dnmt2-homologue (DnmA).Nucleic Acids Res. 2013 Oct;41(18):8615-27. doi: 10.1093/nar/gkt634. Epub 2013 Jul 22. Nucleic Acids Res. 2013. PMID: 23877245 Free PMC article.
-
Comprehensive analysis of m7G modification patterns based on potential m7G regulators and tumor microenvironment infiltration characterization in lung adenocarcinoma.Front Genet. 2022 Sep 29;13:996950. doi: 10.3389/fgene.2022.996950. eCollection 2022. Front Genet. 2022. PMID: 36246663 Free PMC article.
-
Regulation of translation by methylation multiplicity of 18S rRNA.Cell Rep. 2021 Mar 9;34(10):108825. doi: 10.1016/j.celrep.2021.108825. Cell Rep. 2021. PMID: 33691096 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources
Molecular Biology Databases