Crystal structure of the eukaryotic ribosome
- PMID: 21109664
- DOI: 10.1126/science.1194294
Crystal structure of the eukaryotic ribosome
Abstract
Crystal structures of prokaryotic ribosomes have described in detail the universally conserved core of the translation mechanism. However, many facets of the translation process in eukaryotes are not shared with prokaryotes. The crystal structure of the yeast 80S ribosome determined at 4.15 angstrom resolution reveals the higher complexity of eukaryotic ribosomes, which are 40% larger than their bacterial counterparts. Our model shows how eukaryote-specific elements considerably expand the network of interactions within the ribosome and provides insights into eukaryote-specific features of protein synthesis. Our crystals capture the ribosome in the ratcheted state, which is essential for translocation of mRNA and transfer RNA (tRNA), and in which the small ribosomal subunit has rotated with respect to the large subunit. We describe the conformational changes in both ribosomal subunits that are involved in ratcheting and their implications in coordination between the two associated subunits and in mRNA and tRNA translocation.
Similar articles
-
Tightly-orchestrated rearrangements govern catalytic center assembly of the ribosome.Nat Commun. 2019 Feb 27;10(1):958. doi: 10.1038/s41467-019-08880-0. Nat Commun. 2019. PMID: 30814529 Free PMC article.
-
Crystal structure of the ribosome at 5.5 A resolution.Science. 2001 May 4;292(5518):883-96. doi: 10.1126/science.1060089. Epub 2001 Mar 29. Science. 2001. PMID: 11283358
-
Crystal structure of the eukaryotic 60S ribosomal subunit in complex with initiation factor 6.Science. 2011 Nov 18;334(6058):941-8. doi: 10.1126/science.1211204. Epub 2011 Nov 3. Science. 2011. PMID: 22052974
-
Atomic structures of the eukaryotic ribosome.Trends Biochem Sci. 2012 May;37(5):189-98. doi: 10.1016/j.tibs.2012.02.007. Epub 2012 Mar 20. Trends Biochem Sci. 2012. PMID: 22436288 Review.
-
Eukaryotic Ribosome Assembly.Annu Rev Biochem. 2024 Aug;93(1):189-210. doi: 10.1146/annurev-biochem-030222-113611. Epub 2024 Jul 2. Annu Rev Biochem. 2024. PMID: 38768392 Review.
Cited by
-
The ribosome challenge to the RNA world.J Mol Evol. 2015 Apr;80(3-4):143-61. doi: 10.1007/s00239-015-9669-9. Epub 2015 Mar 5. J Mol Evol. 2015. PMID: 25739364 Review.
-
40S subunit dissociation and proteasome-dependent RNA degradation in nonfunctional 25S rRNA decay.EMBO J. 2012 May 30;31(11):2579-89. doi: 10.1038/emboj.2012.85. Epub 2012 Apr 13. EMBO J. 2012. PMID: 22505030 Free PMC article.
-
Structural and functional analysis of the archaeal endonuclease Nob1.Nucleic Acids Res. 2012 Apr;40(7):3259-74. doi: 10.1093/nar/gkr1186. Epub 2011 Dec 10. Nucleic Acids Res. 2012. PMID: 22156373 Free PMC article.
-
Fully automatic characterization and data collection from crystals of biological macromolecules.Acta Crystallogr D Biol Crystallogr. 2015 Aug;71(Pt 8):1757-67. doi: 10.1107/S1399004715011918. Epub 2015 Jul 31. Acta Crystallogr D Biol Crystallogr. 2015. PMID: 26249356 Free PMC article.
-
Ribosome biogenesis factor Tsr3 is the aminocarboxypropyl transferase responsible for 18S rRNA hypermodification in yeast and humans.Nucleic Acids Res. 2016 May 19;44(9):4304-16. doi: 10.1093/nar/gkw244. Epub 2016 Apr 15. Nucleic Acids Res. 2016. PMID: 27084949 Free PMC article.
Publication types
MeSH terms
Substances
Associated data
- Actions
- Actions
- Actions
- Actions
LinkOut - more resources
Full Text Sources
Other Literature Sources
Molecular Biology Databases