Polyadenylation-assisted RNA degradation processes in plants
- PMID: 19716749
- DOI: 10.1016/j.tplants.2009.06.007
Polyadenylation-assisted RNA degradation processes in plants
Abstract
Polyadenylation is a multifunctional post-transcriptional modification that is best known for stabilizing eukaryotic mRNAs and promoting their translation. However, the primordial role of polyadenylation is to target RNAs for degradation by 3' to 5' exoribonucleases. Polyadenylation-assisted RNA degradation contributes to post-transcriptional control in the three genetic compartments of a plant cell: the nucleus, the chloroplast and the mitochondrion. Here, we review the current knowledge of this RNA degradation pathway in these compartments, highlighting recent results that emphasize the crucial role of polyadenylation-assisted RNA degradation in plant genome expression. We also discuss other possible roles of polyadenylation and its sister process polyuridylation.
Similar articles
-
Exonucleases and endonucleases involved in polyadenylation-assisted RNA decay.Wiley Interdiscip Rev RNA. 2011 Jan-Feb;2(1):106-23. doi: 10.1002/wrna.45. Epub 2010 Sep 15. Wiley Interdiscip Rev RNA. 2011. PMID: 21956972 Review.
-
RNA-quality control by the exosome.Nat Rev Mol Cell Biol. 2006 Jul;7(7):529-39. doi: 10.1038/nrm1964. Nat Rev Mol Cell Biol. 2006. PMID: 16829983 Review.
-
Polyadenylation-mediated RNA degradation in plant mitochondria.Methods Enzymol. 2008;447:439-61. doi: 10.1016/S0076-6879(08)02221-0. Methods Enzymol. 2008. PMID: 19161855
-
The cutting crew - ribonucleases are key players in the control of plastid gene expression.J Exp Bot. 2012 Feb;63(4):1663-73. doi: 10.1093/jxb/err401. Epub 2011 Dec 3. J Exp Bot. 2012. PMID: 22140236 Review.
-
Polyuridylation in Eukaryotes: A 3'-End Modification Regulating RNA Life.Biomed Res Int. 2015;2015:968127. doi: 10.1155/2015/968127. Epub 2015 May 11. Biomed Res Int. 2015. PMID: 26078976 Free PMC article. Review.
Cited by
-
Robust Cytonuclear Coordination of Transcription in Nascent Arabidopsis thaliana Autopolyploids.Genes (Basel). 2020 Jan 28;11(2):134. doi: 10.3390/genes11020134. Genes (Basel). 2020. PMID: 32012851 Free PMC article.
-
Landscape of RNA polyadenylation in E. coli.Nucleic Acids Res. 2017 Mar 17;45(5):2746-2756. doi: 10.1093/nar/gkw894. Nucleic Acids Res. 2017. PMID: 28426097 Free PMC article.
-
Crystal structures of CRISPR-associated Csx3 reveal a manganese-dependent deadenylation exoribonuclease.RNA Biol. 2015;12(7):749-60. doi: 10.1080/15476286.2015.1051300. RNA Biol. 2015. PMID: 26106927 Free PMC article.
-
Presence of poly(A) tails at the 3'-termini of some mRNAs of a double-stranded RNA virus, southern rice black-streaked dwarf virus.Viruses. 2015 Mar 31;7(4):1642-50. doi: 10.3390/v7041642. Viruses. 2015. PMID: 25835534 Free PMC article.
-
RNA decay and RNA silencing in plants: competition or collaboration?Front Plant Sci. 2011 Dec 22;2:99. doi: 10.3389/fpls.2011.00099. eCollection 2011. Front Plant Sci. 2011. PMID: 22639621 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Molecular Biology Databases