The consensus coding sequences of human breast and colorectal cancers
- PMID: 16959974
- DOI: 10.1126/science.1133427
The consensus coding sequences of human breast and colorectal cancers
Abstract
The elucidation of the human genome sequence has made it possible to identify genetic alterations in cancers in unprecedented detail. To begin a systematic analysis of such alterations, we determined the sequence of well-annotated human protein-coding genes in two common tumor types. Analysis of 13,023 genes in 11 breast and 11 colorectal cancers revealed that individual tumors accumulate an average of approximately 90 mutant genes but that only a subset of these contribute to the neoplastic process. Using stringent criteria to delineate this subset, we identified 189 genes (average of 11 per tumor) that were mutated at significant frequency. The vast majority of these genes were not known to be genetically altered in tumors and are predicted to affect a wide range of cellular functions, including transcription, adhesion, and invasion. These data define the genetic landscape of two human cancer types, provide new targets for diagnostic and therapeutic intervention, and open fertile avenues for basic research in tumor biology.
Comment in
-
Limits to the Human Cancer Genome Project?Science. 2007 Feb 9;315(5813):762; author reply 764-5. doi: 10.1126/science.315.5813.762b. Science. 2007. PMID: 17289959 No abstract available.
-
Limits to the Human Cancer Genome Project?Science. 2007 Feb 9;315(5813):762; author reply 764-5. Science. 2007. PMID: 17297724 No abstract available.
-
Limits to the Human Cancer Genome Project?Science. 2007 Feb 9;315(5813):762-4; author reply 764-5. Science. 2007. PMID: 17297725 No abstract available.
-
Comment on "The consensus coding sequences of human breast and colorectal cancers".Science. 2007 Sep 14;317(5844):1500; author reply 1500. doi: 10.1126/science.1138179. Science. 2007. PMID: 17872427
-
Comment on "The consensus coding sequences of human breast and colorectal cancers".Science. 2007 Sep 14;317(5844):1500. doi: 10.1126/science.1138764. Science. 2007. PMID: 17872428
-
Comment on "The consensus coding sequences of human breast and colorectal cancers".Science. 2007 Sep 14;317(5844):1500. doi: 10.1126/science.1138956. Science. 2007. PMID: 17872429
Similar articles
-
Comment on "The consensus coding sequences of human breast and colorectal cancers".Science. 2007 Sep 14;317(5844):1500; author reply 1500. doi: 10.1126/science.1138179. Science. 2007. PMID: 17872427
-
Comment on "The consensus coding sequences of human breast and colorectal cancers".Science. 2007 Sep 14;317(5844):1500. doi: 10.1126/science.1138956. Science. 2007. PMID: 17872429
-
The genomic landscapes of human breast and colorectal cancers.Science. 2007 Nov 16;318(5853):1108-13. doi: 10.1126/science.1145720. Epub 2007 Oct 11. Science. 2007. PMID: 17932254
-
Systematic analyses of the cancer genome: lessons learned from sequencing most of the annotated human protein-coding genes.Curr Opin Oncol. 2008 Jan;20(1):66-71. doi: 10.1097/CCO.0b013e3282f31108. Curr Opin Oncol. 2008. PMID: 18043258 Review.
-
Genetic alterations in the adenoma--carcinoma sequence.Cancer. 1992 Sep 15;70(6 Suppl):1727-31. doi: 10.1002/1097-0142(19920915)70:4+<1727::aid-cncr2820701613>3.0.co;2-p. Cancer. 1992. PMID: 1516027 Review.
Cited by
-
Novel prognostic signature for hepatocellular carcinoma using a comprehensive machine learning framework to predict prognosis and guide treatment.Front Immunol. 2024 Sep 24;15:1454977. doi: 10.3389/fimmu.2024.1454977. eCollection 2024. Front Immunol. 2024. PMID: 39380994 Free PMC article.
-
Novel Mutations in AKT1 Gene in Prostate Cancer Patients in Jordan.Curr Issues Mol Biol. 2024 Sep 4;46(9):9856-9866. doi: 10.3390/cimb46090586. Curr Issues Mol Biol. 2024. PMID: 39329938 Free PMC article.
-
Worldwide analysis of actionable genomic alterations in lung cancer and targeted pharmacogenomic strategies.Heliyon. 2024 Sep 5;10(17):e37488. doi: 10.1016/j.heliyon.2024.e37488. eCollection 2024 Sep 15. Heliyon. 2024. PMID: 39296198 Free PMC article.
-
Genetic polymorphism and immunological evaluation of PD-1 in Iraqi patients with acute myeloid leukemia.J Adv Pharm Technol Res. 2024 Jul-Sep;15(3):225-230. doi: 10.4103/JAPTR.JAPTR_107_24. Epub 2024 Jul 22. J Adv Pharm Technol Res. 2024. PMID: 39290538 Free PMC article.
-
Targeting Isocitrate Dehydrogenase (IDH) in Solid Tumors: Current Evidence and Future Perspectives.Cancers (Basel). 2024 Aug 2;16(15):2752. doi: 10.3390/cancers16152752. Cancers (Basel). 2024. PMID: 39123479 Free PMC article. Review.
Publication types
MeSH terms
Grants and funding
LinkOut - more resources
Full Text Sources
Other Literature Sources
Medical
Molecular Biology Databases
Research Materials