Direct observation of the three-state folding of a single protein molecule
- PMID: 16179479
- DOI: 10.1126/science.1116702
Direct observation of the three-state folding of a single protein molecule
Abstract
We used force-measuring optical tweezers to induce complete mechanical unfolding and refolding of individual Escherichia coli ribonuclease H (RNase H) molecules. The protein unfolds in a two-state manner and refolds through an intermediate that correlates with the transient molten globule-like intermediate observed in bulk studies. This intermediate displays unusual mechanical compliance and unfolds at substantially lower forces than the native state. In a narrow range of forces, the molecule hops between the unfolded and intermediate states in real time. Occasionally, hopping was observed to stop as the molecule crossed the folding barrier directly from the intermediate, demonstrating that the intermediate is on-pathway. These studies allow us to map the energy landscape of RNase H.
Similar articles
-
Confirmation of the hierarchical folding of RNase H: a protein engineering study.Nat Struct Biol. 1999 Sep;6(9):825-31. doi: 10.1038/12277. Nat Struct Biol. 1999. PMID: 10467093
-
Kinetically robust monomeric protein from a hyperthermophile.Biochemistry. 2004 Nov 2;43(43):13859-66. doi: 10.1021/bi0487645. Biochemistry. 2004. PMID: 15504048
-
Molten globule unfolding monitored by hydrogen exchange in urea.Biochemistry. 1998 Feb 17;37(7):1736-42. doi: 10.1021/bi972692i. Biochemistry. 1998. PMID: 9492739
-
Touring the landscapes: partially folded proteins examined by hydrogen exchange.Structure. 1997 Jul 15;5(7):859-63. doi: 10.1016/s0969-2126(97)00240-2. Structure. 1997. PMID: 9261079 Review.
-
[Remembrance of things past: a career in a chiroptical work].Tanpakushitsu Kakusan Koso. 1994 Nov;39(14):2275-83. Tanpakushitsu Kakusan Koso. 1994. PMID: 7809373 Review. Japanese. No abstract available.
Cited by
-
Insights into chromatin fibre structure by in vitro and in silico single-molecule stretching experiments.Biochem Soc Trans. 2013 Apr;41(2):494-500. doi: 10.1042/BST20120349. Biochem Soc Trans. 2013. PMID: 23514142 Free PMC article. Review.
-
Ratcheting up protein translocation with anthrax toxin.Protein Sci. 2012 May;21(5):606-24. doi: 10.1002/pro.2052. Epub 2012 Mar 30. Protein Sci. 2012. PMID: 22374876 Free PMC article. Review.
-
Kinetically coupled folding of a single HIV-1 glycoprotein 41 complex in viral membrane fusion and inhibition.Proc Natl Acad Sci U S A. 2015 Jun 2;112(22):E2855-64. doi: 10.1073/pnas.1424995112. Epub 2015 May 18. Proc Natl Acad Sci U S A. 2015. PMID: 26038562 Free PMC article.
-
Single-molecule folding mechanisms of the apo- and Mg(2+)-bound states of human neuronal calcium sensor-1.Biophys J. 2015 Jul 7;109(1):113-23. doi: 10.1016/j.bpj.2015.05.028. Biophys J. 2015. PMID: 26153708 Free PMC article.
-
Mechanical unzipping and rezipping of a single SNARE complex reveals hysteresis as a force-generating mechanism.Nat Commun. 2013;4:1705. doi: 10.1038/ncomms2692. Nat Commun. 2013. PMID: 23591872 Free PMC article.
Publication types
MeSH terms
Substances
Grants and funding
LinkOut - more resources
Full Text Sources
Other Literature Sources
Molecular Biology Databases