ATP-binding cassette protein E is involved in gene transcription and translation in Caenorhabditis elegans
- PMID: 15351708
- DOI: 10.1016/j.bbrc.2004.08.068
ATP-binding cassette protein E is involved in gene transcription and translation in Caenorhabditis elegans
Abstract
ATP-binding cassette protein E (ABCE) gene has been annotated as an RNase L inhibitor in eukaryotes. All eukaryotic species show the ubiquitous presence and high degree of conservation of ABCEs, however, RNase L is present only in mammals. This indicates that ABCEs may function not only as RNase L inhibitors, but also may have other functions that have yet to be determined. As an initial investigation into the novel functions of ABCE, we characterized the gene (Y39E4B.1) in Caenorhabditis elegans by a combination of data mining and functional assays. ABCE promoters drove GFP expressions in hypoderm, pharynx, vulvae, head, and tail neurons at all developmental stages. Three genes, rpl-4, nhr-91, and C07B5.3, were previously found to interact with ABCE. Our expression data showed overlapping expression patterns of ABCE and rpl-4 and nhr-91, but not C07B5.3. RNAi against ABCE resulted in embryonic lethality and slow growth. These data suggest that ABCE protein might be involved in the control of translation and transcription, work as shuttle protein between cytoplasm and nucleus, and possibly as a nucleocytoplasmic transporter. In addition, RNAi data suggest that ABCE and NHR-91 may function in vulvae development and molting pathways in C. elegans. Furthermore, our data suggest that ABCE, along with its interacting components, functions in a well-conserved pathway.
Copyright 2004 Elsevier Inc.
Similar articles
-
Sequence analysis of twin ATP binding cassette proteins involved in translational control, antibiotic resistance, and ribonuclease L inhibition.Biochem Biophys Res Commun. 2004 Feb 27;315(1):166-73. doi: 10.1016/j.bbrc.2004.01.044. Biochem Biophys Res Commun. 2004. PMID: 15013441
-
The Caenorhabditis elegans cathepsin Z-like cysteine protease, Ce-CPZ-1, has a multifunctional role during the worms' development.J Biol Chem. 2004 Feb 13;279(7):6035-45. doi: 10.1074/jbc.M312346200. Epub 2003 Nov 20. J Biol Chem. 2004. PMID: 14630920
-
Expression analysis of ABC transporters reveals differential functions of tandemly duplicated genes in Caenorhabditis elegans.J Mol Biol. 2004 Nov 19;344(2):409-17. doi: 10.1016/j.jmb.2004.09.052. J Mol Biol. 2004. PMID: 15522294
-
ABCE Proteins: From Molecules to Development.Front Plant Sci. 2018 Aug 3;9:1125. doi: 10.3389/fpls.2018.01125. eCollection 2018. Front Plant Sci. 2018. PMID: 30127795 Free PMC article. Review.
-
Techniques for analyzing transcription and translation.Methods Cell Biol. 1995;48:513-29. doi: 10.1016/s0091-679x(08)61401-6. Methods Cell Biol. 1995. PMID: 8531740 Review. No abstract available.
Cited by
-
Ribosome recycling is coordinated by processive events in two asymmetric ATP sites of ABCE1.Life Sci Alliance. 2018 Jun 14;1(3):e201800095. doi: 10.26508/lsa.201800095. Life Sci Alliance. 2018. PMID: 30198020 Free PMC article.
-
A method for rapid and simultaneous mapping of genetic loci and introgression sizes in nematode species.PLoS One. 2012;7(8):e43770. doi: 10.1371/journal.pone.0043770. Epub 2012 Aug 31. PLoS One. 2012. PMID: 22952761 Free PMC article.
-
Kinetic analysis reveals the ordered coupling of translation termination and ribosome recycling in yeast.Proc Natl Acad Sci U S A. 2011 Dec 20;108(51):E1392-8. doi: 10.1073/pnas.1113956108. Epub 2011 Dec 5. Proc Natl Acad Sci U S A. 2011. PMID: 22143755 Free PMC article.
-
Genome-Wide Identification and Expression Profiling of ATP-Binding Cassette (ABC) Transporter Gene Family in Pineapple (Ananas comosus (L.) Merr.) Reveal the Role of AcABCG38 in Pollen Development.Front Plant Sci. 2017 Dec 19;8:2150. doi: 10.3389/fpls.2017.02150. eCollection 2017. Front Plant Sci. 2017. PMID: 29312399 Free PMC article.
-
ABC50 promotes translation initiation in mammalian cells.J Biol Chem. 2009 Sep 4;284(36):24061-73. doi: 10.1074/jbc.M109.031625. Epub 2009 Jul 1. J Biol Chem. 2009. PMID: 19570978 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Research Materials