Toward a cytogenetically based physical map of the wheat genome
- PMID: 1360666
- PMCID: PMC50539
- DOI: 10.1073/pnas.89.23.11307
Toward a cytogenetically based physical map of the wheat genome
Abstract
Bread wheat (Triticum aestivum L. em Thell) is well suited for cytogenetic analysis because the genome, buffered by polyploidy, can tolerate structurally and numerically engineered chromosomes for analysis over infinite generations. This feature of polyploidy can be used in developing a high-resolution, cytogenetically based physical map of the wheat genome. We show that numerous deletions, observed in the progeny of a monosomic addition of a chromosome from Triticum cylindricum in wheat, result from single breakpoints and a concomitant loss of distal fragments. Breakages occurred in euchromatic and heterochromatic regions. Forty-one deletions for chromosomes 7A, 7B, and 7D, and a set of genetically mapped DNA probes, were used to construct physical maps. Recombination was low in proximal chromosomal regions and very high toward the distal ends. Deletion mapping was more efficient than genetic mapping in resolving the order of proximal loci. Despite variation in size and arm ratio, relative gene position was largely conserved among chromosomes 7A, 7B, and 7D and a consensus group 7 physical map was constructed. Several molecularly tagged chromosome regions (MTCRs) of approximately one to a few million base pairs were identified that may be resolved by long-range mapping of DNA fragments. Thus, a cytogenetically based physical map may be used to integrate chromosome and DNA-based maps. The MTCRs may simplify strategies for cloning of agronomically useful genes despite the genetic complexity and the large genome size of wheat.
Similar articles
-
Comparison of genetic and physical maps of group 7 chromosomes from Triticum aestivum L.Mol Gen Genet. 1994 Dec 1;245(5):644-53. doi: 10.1007/BF00282228. Mol Gen Genet. 1994. PMID: 7808416
-
Dissection and cytological mapping of barley chromosome 2H in the genetic background of common wheat.Genes Genet Syst. 2011;86(4):231-48. doi: 10.1266/ggs.86.231. Genes Genet Syst. 2011. PMID: 22214592
-
Subgenome chromosome walking in wheat: a 450-kb physical contig in Triticum monococcum L. spans the Lr10 resistance locus in hexaploid wheat (Triticum aestivum L.).Proc Natl Acad Sci U S A. 2000 Nov 21;97(24):13436-41. doi: 10.1073/pnas.230361597. Proc Natl Acad Sci U S A. 2000. PMID: 11078510 Free PMC article.
-
Chromosome 1 in relation to human disease.J Med Genet. 1986 Apr;23(2):107-15. doi: 10.1136/jmg.23.2.107. J Med Genet. 1986. PMID: 3519970 Free PMC article. Review.
-
Using chromosome features in genome mapping.Trends Biotechnol. 1992 Jan-Feb;10(1-2):23-6. doi: 10.1016/0167-7799(92)90162-o. Trends Biotechnol. 1992. PMID: 1367927 Review.
Cited by
-
Transcription and histone modifications in the recombination-free region spanning a rice centromere.Plant Cell. 2005 Dec;17(12):3227-38. doi: 10.1105/tpc.105.037945. Epub 2005 Nov 4. Plant Cell. 2005. PMID: 16272428 Free PMC article.
-
Saturation mapping of a gene-rich recombination hot spot region in wheat.Genetics. 2000 Feb;154(2):823-35. doi: 10.1093/genetics/154.2.823. Genetics. 2000. PMID: 10655233 Free PMC article.
-
Isolation and characterization of RAPD-based markers linked to the beet cyst nematode resistance locus (Hs1 (pat-1)) on chromosome 1 of B. patellaris.Theor Appl Genet. 1995 May;90(6):885-91. doi: 10.1007/BF00222027. Theor Appl Genet. 1995. PMID: 24172934
-
Physical mapping of translocation breakpoints in rye by means of synaptonemal complex analysis.Theor Appl Genet. 1994 Sep;89(1):33-41. doi: 10.1007/BF00226979. Theor Appl Genet. 1994. PMID: 24177766
-
Wheat genomics: present status and future prospects.Int J Plant Genomics. 2008;2008:896451. doi: 10.1155/2008/896451. Int J Plant Genomics. 2008. PMID: 18528518 Free PMC article.
References
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources