Deciphering genetic regulatory codes: a challenge for functional genomics
- PMID: 11805309
- PMCID: PMC117339
- DOI: 10.1073/pnas.032685999
Deciphering genetic regulatory codes: a challenge for functional genomics
Comment on
-
Genome-wide analysis of clustered Dorsal binding sites identifies putative target genes in the Drosophila embryo.Proc Natl Acad Sci U S A. 2002 Jan 22;99(2):763-8. doi: 10.1073/pnas.012591199. Epub 2001 Dec 18. Proc Natl Acad Sci U S A. 2002. PMID: 11752406 Free PMC article.
-
Exploiting transcription factor binding site clustering to identify cis-regulatory modules involved in pattern formation in the Drosophila genome.Proc Natl Acad Sci U S A. 2002 Jan 22;99(2):757-62. doi: 10.1073/pnas.231608898. Proc Natl Acad Sci U S A. 2002. PMID: 11805330 Free PMC article.
Similar articles
-
Evolution of developmental genes: molecular microevolution of enhancer sequences at the Ubx locus in Drosophila and its impact on developmental phenotypes.Mol Biol Evol. 2004 Feb;21(2):348-63. doi: 10.1093/molbev/msh025. Epub 2003 Dec 5. Mol Biol Evol. 2004. PMID: 14660693
-
One thousand and one ways of making functionally similar transcriptional enhancers.Bioessays. 2008 Nov;30(11-12):1052-7. doi: 10.1002/bies.20849. Bioessays. 2008. PMID: 18937349 Review.
-
Ensuring enhancer fidelity.Nat Genet. 2003 Aug;34(4):360-1. doi: 10.1038/ng0803-360. Nat Genet. 2003. PMID: 12923541 No abstract available.
-
Evolution of gene expression in the Drosophila melanogaster subgroup.Nat Genet. 2003 Feb;33(2):138-44. doi: 10.1038/ng1086. Epub 2003 Jan 27. Nat Genet. 2003. PMID: 12548287
-
Unraveling cis-regulatory mechanisms at the abdominal-A and Abdominal-B genes in the Drosophila bithorax complex.Dev Biol. 2006 May 15;293(2):294-304. doi: 10.1016/j.ydbio.2006.02.015. Epub 2006 Mar 20. Dev Biol. 2006. PMID: 16545794 Review.
Cited by
-
Detecting genome-wide directional effects of transcription factor binding on polygenic disease risk.Nat Genet. 2018 Oct;50(10):1483-1493. doi: 10.1038/s41588-018-0196-7. Epub 2018 Sep 3. Nat Genet. 2018. PMID: 30177862 Free PMC article.
-
Application of Biostatistics and Bioinformatics Tools to Identify Putative Transcription Factor-Gene Regulatory Network of Ankylosing Spondylitis and Sarcoidosis.Commun Stat Theory Methods. 2009 Jan 1;38(18):3326-3338. doi: 10.1080/03610920902898472. Commun Stat Theory Methods. 2009. PMID: 20037664 Free PMC article.
-
Retinoid regulated association of transcriptional co-regulators and the polycomb group protein SUZ12 with the retinoic acid response elements of Hoxa1, RARbeta(2), and Cyp26A1 in F9 embryonal carcinoma cells.J Mol Biol. 2007 Sep 14;372(2):298-316. doi: 10.1016/j.jmb.2007.06.079. Epub 2007 Jul 3. J Mol Biol. 2007. PMID: 17663992 Free PMC article.
-
The SCL transcriptional network and BMP signaling pathway interact to regulate RUNX1 activity.Proc Natl Acad Sci U S A. 2007 Jan 16;104(3):840-5. doi: 10.1073/pnas.0607196104. Epub 2007 Jan 9. Proc Natl Acad Sci U S A. 2007. PMID: 17213321 Free PMC article.
-
The importance of being flexible: the case of basic region leucine zipper transcriptional regulators.Curr Protein Pept Sci. 2009 Jun;10(3):244-69. doi: 10.2174/138920309788452164. Curr Protein Pept Sci. 2009. PMID: 19519454 Free PMC article. Review.
References
-
- Blackwood E M, Kadonaga J T. Science. 1998;281:60–63. - PubMed
-
- Davidson E H. Genomic Regulatory Systems. San Diego: Academic; 2001.
-
- Carroll S B, Grenier J K, Weatherbee S D. From DNA to Diversity: Molecular Genetics and the Evolution of Animal Design. Malden, MA: Blackwell Science; 2001.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Molecular Biology Databases