Systems analysis of Ran transport
- PMID: 11799242
- DOI: 10.1126/science.1064732
Systems analysis of Ran transport
Abstract
The separate components of nucleocytoplasmic transport have been well characterized, including the key regulatory role of Ran, a guanine nucleotide triphosphatase. However, the overall system behavior in intact cells is difficult to analyze because the dynamics of these components are interdependent. We used a combined experimental and computational approach to study Ran transport in vivo. The resulting model provides the first quantitative picture of Ran flux between the nuclear and cytoplasmic compartments in eukaryotic cells. The model predicts that the Ran exchange factor RCC1, and not the flux capacity of the nuclear pore complex (NPC), is the crucial regulator of steady-state flux across the NPC. Moreover, it provides the first estimate of the total in vivo flux (520 molecules per NPC per second and predicts that the transport system is robust.
Similar articles
-
Characterization of Ran-driven cargo transport and the RanGTPase system by kinetic measurements and computer simulation.EMBO J. 2003 Mar 3;22(5):1088-100. doi: 10.1093/emboj/cdg113. EMBO J. 2003. PMID: 12606574 Free PMC article.
-
Engineered mutants in the switch II loop of Ran define the contribution made by key residues to the interaction with nuclear transport factor 2 (NTF2) and the role of this interaction in nuclear protein import.J Mol Biol. 1999 Jun 11;289(3):565-77. doi: 10.1006/jmbi.1999.2775. J Mol Biol. 1999. PMID: 10356329
-
Computational and biochemical identification of a nuclear pore complex binding site on the nuclear transport carrier NTF2.J Mol Biol. 2004 Nov 19;344(2):303-10. doi: 10.1016/j.jmb.2004.09.043. J Mol Biol. 2004. PMID: 15522285
-
Ran on tracks--cytoplasmic roles for a nuclear regulator.J Cell Sci. 2009 Mar 1;122(Pt 5):587-93. doi: 10.1242/jcs.015289. J Cell Sci. 2009. PMID: 19225125 Review.
-
The Ran-GTPase and cell-cycle control.Bioessays. 2001 Jan;23(1):77-85. doi: 10.1002/1521-1878(200101)23:1<77::AID-BIES1010>3.0.CO;2-E. Bioessays. 2001. PMID: 11135312 Review.
Cited by
-
RCC1 depletion drives protein transport defects and rupture in micronuclei.bioRxiv [Preprint]. 2024 Sep 5:2024.09.04.611299. doi: 10.1101/2024.09.04.611299. bioRxiv. 2024. PMID: 39282444 Free PMC article. Preprint.
-
Nuclear size is regulated by importin α and Ntf2 in Xenopus.Cell. 2010 Oct 15;143(2):288-98. doi: 10.1016/j.cell.2010.09.012. Cell. 2010. PMID: 20946986 Free PMC article.
-
Computational approaches for modeling regulatory cellular networks.Trends Cell Biol. 2004 Dec;14(12):661-9. doi: 10.1016/j.tcb.2004.10.007. Trends Cell Biol. 2004. PMID: 15564042 Free PMC article. Review.
-
Association of variants of miRNA processing genes with cervical precancerous lesion risk in a southern Chinese population.Biosci Rep. 2018 May 31;38(3):BSR20171565. doi: 10.1042/BSR20171565. Print 2018 Jun 29. Biosci Rep. 2018. PMID: 29853562 Free PMC article.
-
Allosteric control of the exportin CRM1 unraveled by crystal structure analysis.FEBS J. 2014 Sep;281(18):4179-94. doi: 10.1111/febs.12842. Epub 2014 Jun 6. FEBS J. 2014. PMID: 24823279 Free PMC article. Review.
Publication types
MeSH terms
Substances
Grants and funding
LinkOut - more resources
Full Text Sources
Other Literature Sources
Molecular Biology Databases
Miscellaneous