Assisted folding of D-glyceraldehyde-3-phosphate dehydrogenase by trigger factor
- PMID: 10892818
- PMCID: PMC2144665
- DOI: 10.1110/ps.9.6.1254
Assisted folding of D-glyceraldehyde-3-phosphate dehydrogenase by trigger factor
Abstract
The Escherichia coli trigger factor is a peptidyl-prolyl cis-trans isomerase that catalyzes proline-limited protein folding extremely well. Here, refolding of D-glyceraldehyde-3-phosphate dehydrogenase (GAPDH) in the presence of trigger factor was investigated. The regain of activity of GAPDH was markedly increased by trigger factor after either long- or short-term denaturation, and detectable aggregation of GAPDH intermediates was prevented. In both cases, time courses of refolding of GAPDH were decelerated by trigger factor. The reactivation yield of GAPDH showed a slow down-turn when molar ratios of trigger factor to GAPDH were above 5, due to tight binding between trigger factor and GAPDH intermediates. Such inactive bound GAPDH could be partially rescued from trigger factor by addition of reduced alphaLA as competitor, by further diluting the refolding mixture, or by disrupting hydrophobic interactions in the complexes. A model for trigger factor assisted refolding of GAPDH is proposed. We also suggest that assisted refolding of GAPDH is due mainly to the chaperone function of trigger factor.
Similar articles
-
Functional dissection of Escherichia coli trigger factor: unraveling the function of individual domains.J Bacteriol. 2004 Jun;186(12):3777-84. doi: 10.1128/JB.186.12.3777-3784.2004. J Bacteriol. 2004. PMID: 15175291 Free PMC article.
-
GroEL-assisted dehydrogenase folding mediated by coenzyme is ATP-independent.Biochem Biophys Res Commun. 2001 Jul 13;285(2):277-82. doi: 10.1006/bbrc.2001.5182. Biochem Biophys Res Commun. 2001. PMID: 11444838
-
PPIase domain of trigger factor acts as auxiliary chaperone site to assist the folding of protein substrates bound to the crevice of trigger factor.Int J Biochem Cell Biol. 2010 Jun;42(6):890-901. doi: 10.1016/j.biocel.2010.01.019. Epub 2010 Jan 21. Int J Biochem Cell Biol. 2010. PMID: 20096367
-
A cradle for new proteins: trigger factor at the ribosome.Curr Opin Struct Biol. 2005 Apr;15(2):204-12. doi: 10.1016/j.sbi.2005.03.005. Curr Opin Struct Biol. 2005. PMID: 15837180 Review.
-
Glyceraldehyde-3-phosphate dehydrogenase: Aggregation mechanisms and impact on amyloid neurodegenerative diseases.Int J Biol Macromol. 2017 Jul;100:55-66. doi: 10.1016/j.ijbiomac.2016.05.066. Epub 2016 May 20. Int J Biol Macromol. 2017. PMID: 27215901 Review.
Cited by
-
The crystal structure of ribosomal chaperone trigger factor from Vibrio cholerae.Proc Natl Acad Sci U S A. 2004 Sep 14;101(37):13436-41. doi: 10.1073/pnas.0405868101. Epub 2004 Sep 7. Proc Natl Acad Sci U S A. 2004. PMID: 15353602 Free PMC article.
-
FK506-binding protein of the hyperthermophilic archaeum, Thermococcus sp. KS-1, a cold-shock-inducible peptidyl-prolyl cis-trans isomerase with activities to trap and refold denatured proteins.Biochem J. 2001 Jul 15;357(Pt 2):465-71. doi: 10.1042/0264-6021:3570465. Biochem J. 2001. PMID: 11439096 Free PMC article.
-
Trigger factor both holds and folds its client proteins.Nat Commun. 2022 Jul 15;13(1):4126. doi: 10.1038/s41467-022-31767-6. Nat Commun. 2022. PMID: 35840586 Free PMC article.
-
Hydrophobic collapse of trigger factor monomer in solution.PLoS One. 2013;8(4):e59683. doi: 10.1371/journal.pone.0059683. Epub 2013 Apr 2. PLoS One. 2013. PMID: 23565160 Free PMC article.
-
Functional dissection of Escherichia coli trigger factor: unraveling the function of individual domains.J Bacteriol. 2004 Jun;186(12):3777-84. doi: 10.1128/JB.186.12.3777-3784.2004. J Bacteriol. 2004. PMID: 15175291 Free PMC article.
References
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources
Molecular Biology Databases
Research Materials