doi: 10.1093/nar/28.1.306.
REBASE - restriction enzymes and methylases
Affiliations
- PMID: 10592256
- PMCID: PMC102482
- DOI: 10.1093/nar/28.1.306
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REBASE - restriction enzymes and methylases
Nucleic Acids Res.
.
Abstract
REBASE is a comprehensive database of information about restriction enzymes and related proteins. It contains published and unpublished references, recognition and cleavage sites, isoschizomers, commercial availability, methylation sensitivity, crystal and sequence data. DNA methyltransferases, homing endonucleases, nicking enzymes, specificity subunits and control proteins are also included. Most recently, putative DNA methyltransferases and restriction enzymes, as predicted from analysis of genomic sequences, are also listed. The data is distributed via Email, ftp (ftp.neb.com), and the Web (http://rebase.neb.com).
Figures
The genetic organization of the BamHI restriction–modification system (4). The red and yellow flags above the M.BamHI methyltransferase gene indicate the locations of the two sequence motifs characteristic of amino-methyltransferases.
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References
-
- Smith H.O. and Nathans,D.J. (1973) J. Mol. Biol., 81, 419–423. - PubMed
-
- Bult C.J., White,O., Olsen,G.J., Zhou,L., Fleischmann,R.D.,Sutton, G.G., Blake,J.A., FitzGerald,L.M., Clayton,R.A., Gocayne,J.D. et al. (1996) Science, 273, 1058–1073. - PubMed
-
- Ivic A., Jakeman,K.J., Penn,C.W. and Brown,N.L. (1999) FEMS Microbiol. Lett., 179, 175–180. - PubMed
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