The expression of three abundance classes of messenger RNA in mouse tissues
- PMID: 1017013
- DOI: 10.1016/0092-8674(76)90139-2
The expression of three abundance classes of messenger RNA in mouse tissues
Abstract
Using the technique of mRNA-cDNA hybridization, we have shown that there are between 11,500 and 12,500 different mRNAs in three different mouse tissues:kidneys, brains, and livers. Several experiments suggest that in each tissue the mRNAs are organized into three abundance classes rather than as a continumm with respect to concentration. Cross-hybridization experminets show that the most abundant class of mRNA in each tissue is characteristic, and that a high proportion of the total sequences are common between tissues. For a more complete analysis, cDNA was fractionated into three classes. Studies using isolated abundant cDNA show that some abundant sequences of liver and kidney are present in other tissues, but among the lower frequency classes. Thus tissue-specific differences in mRNA populations may be related to abundance as well as qualitative differences. Using isolated middle frequency cDNA of the kidney, it was shown that of the 550 or so sequences in this class, approximately 500 are shared with the liver. Similarly, between 9,500 and 10,500 of the low frequency kidney cDNAs are shared with the brain and liver, respectively, suggesting that the majority of mRNAs may be involved with "housekeeping" activities. In an attempt to see whether abundance of mRNA is related to repetition of the sequence in the genome, it was shown that abundant and middle frequency cDNA of the liver and kidney contain a component that anneals with DNA repeated approximately 100 fold. However, the low frequency cDNA of the kidney contains no repeated sequences.
Similar articles
-
Size distribution of rat liver nuclear RNA containing mRNA sequences.Eur J Biochem. 1977 Jul 1;77(1):153-64. doi: 10.1111/j.1432-1033.1977.tb11653.x. Eur J Biochem. 1977. PMID: 908333
-
Androgenic regulation of messenger RNA sequence complexity in accessory sexual tissues of the male rat studied with fractionated complementary DNA.Eur J Biochem. 1979 Dec 17;102(2):431-40. doi: 10.1111/j.1432-1033.1979.tb04258.x. Eur J Biochem. 1979. PMID: 527587
-
Diversity of sequences of polyadenylated cytoplasmic RNA from rainbow trout (Salmo gairdnerii) testis and liver.Biochemistry. 1977 Mar 8;16(5):958-64. doi: 10.1021/bi00624a023. Biochemistry. 1977. PMID: 557333
-
Poly(adenylic acid)-containing and -deficient messenger RNA of mouse liver.Biochim Biophys Acta. 1981 Jan 29;652(1):177-92. doi: 10.1016/0005-2787(81)90221-5. Biochim Biophys Acta. 1981. PMID: 6111346
-
Quantitation of casein messenger ribonucleic acid sequences using a specific complementary DNA hybridization probe.Biochemistry. 1976 Nov 30;15(24):5272-80. doi: 10.1021/bi00669a012. Biochemistry. 1976. PMID: 63286
Cited by
-
Isolation and preliminary characterisation of cDNA clones representing mRNAs associated with tumour progression and metastasis in colorectal cancer.Br J Cancer. 1988 Jan;57(1):36-42. doi: 10.1038/bjc.1988.5. Br J Cancer. 1988. PMID: 2450556 Free PMC article.
-
Global transcriptional profiling of the toxic dinoflagellate Alexandrium fundyense using Massively Parallel Signature Sequencing.BMC Genomics. 2006 Apr 25;7:88. doi: 10.1186/1471-2164-7-88. BMC Genomics. 2006. PMID: 16638123 Free PMC article.
-
Sequence diversity of polysomal mRNAs in roots and shoots of etiolated and greened pea seedlings.Planta. 1983 Jun;158(1):42-50. doi: 10.1007/BF00395401. Planta. 1983. PMID: 24264446
-
Future Perspectives for the Identification and Sequencing of Nicotinamide Adenine Dinucleotide-Capped RNAs.Acc Chem Res. 2023 Nov 7;56(21):3000-3009. doi: 10.1021/acs.accounts.3c00446. Epub 2023 Oct 18. Acc Chem Res. 2023. PMID: 37852615 Free PMC article.
-
The most abundant maternal lncRNA Sirena1 acts post-transcriptionally and impacts mitochondrial distribution.Nucleic Acids Res. 2020 Apr 6;48(6):3211-3227. doi: 10.1093/nar/gkz1239. Nucleic Acids Res. 2020. PMID: 31956907 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources