The plant U1 small nuclear ribonucleoprotein particle 70K protein interacts with two novel serine/arginine-rich proteins
- PMID: 9761791
- PMCID: PMC143944
- DOI: 10.1105/tpc.10.10.1637
The plant U1 small nuclear ribonucleoprotein particle 70K protein interacts with two novel serine/arginine-rich proteins
Abstract
The U1 small nuclear ribonucleoprotein particle (U1 snRNP) 70K protein (U1-70K), one of the three U1 snRNP-specific proteins, is implicated in basic and alternative splicing of nuclear pre-mRNAs. We have used the Arabidopsis U1-70K in the yeast two-hybrid system to isolate cDNAs encoding proteins that interact with it. This screening has resulted in the isolation of two novel plant serine/arginine-rich (SR) proteins, SRZ-22 and SRZ-21 (SRZ proteins). Neither the N-terminal region nor the arginine-rich C-terminal region of U1-70K alone interact with the SRZ proteins. The interaction of U1-70K with the SRZ proteins is confirmed further in vitro using a blot overlay assay. The plant SRZ proteins are highly similar to each other and contain conserved modular domains unique to different groups of splicing factors in the SR family of proteins. SRZ proteins are similar to human 9G8 splicing factor because they contain a zinc knuckle, precipitate with 65% ammonium sulfate, and cross-react with the 9G8 monoclonal antibody. However, unlike the 9G8 splicing factor, SRZ proteins contain a glycine hinge, a unique feature in other splicing factors (SC35 and ASF/SF2), located between the RNA binding domain and the zinc knuckle. SRZ-22 and SRZ-21 are encoded by two distinct genes and are expressed in all tissues tested with varied levels of expression. Our results suggest that the plant SRZ proteins represent a new group of SR proteins. The interaction of plant U1-70K with the SRZ proteins may account for some differences in pre-mRNA splicing between plants and animals.
Similar articles
-
Structure and expression of a plant U1 snRNP 70K gene: alternative splicing of U1 snRNP 70K pre-mRNAs produces two different transcripts.Plant Cell. 1996 Aug;8(8):1421-35. doi: 10.1105/tpc.8.8.1421. Plant Cell. 1996. PMID: 8776903 Free PMC article.
-
An SC35-like protein and a novel serine/arginine-rich protein interact with Arabidopsis U1-70K protein.J Biol Chem. 1999 Dec 17;274(51):36428-38. doi: 10.1074/jbc.274.51.36428. J Biol Chem. 1999. PMID: 10593939
-
A serine/arginine-rich domain in the human U1 70k protein is necessary and sufficient for ASF/SF2 binding.J Biol Chem. 1998 Aug 7;273(32):20629-35. doi: 10.1074/jbc.273.32.20629. J Biol Chem. 1998. PMID: 9685421
-
Arabidopsis U1 snRNP 70K protein and its interacting proteins: nuclear localization and in vivo dynamics of a novel plant-specific serine/arginine-rich protein.Symp Soc Exp Biol. 2004;(56):279-95. Symp Soc Exp Biol. 2004. PMID: 15565888 Review. No abstract available.
-
Plant serine/arginine-rich proteins: roles in precursor messenger RNA splicing, plant development, and stress responses.Wiley Interdiscip Rev RNA. 2011 Nov-Dec;2(6):875-89. doi: 10.1002/wrna.98. Epub 2011 Jul 15. Wiley Interdiscip Rev RNA. 2011. PMID: 21766458 Review.
Cited by
-
Expression of U1 small nuclear ribonucleoprotein 70K antisense transcript using APETALA3 promoter suppresses the development of sepals and petals.Plant Physiol. 2003 Aug;132(4):1884-91. doi: 10.1104/pp.103.023192. Plant Physiol. 2003. PMID: 12913145 Free PMC article.
-
Glycine-serine-rich effector PstGSRE4 in Puccinia striiformis f. sp. tritici inhibits the activity of copper zinc superoxide dismutase to modulate immunity in wheat.PLoS Pathog. 2022 Jul 26;18(7):e1010702. doi: 10.1371/journal.ppat.1010702. eCollection 2022 Jul. PLoS Pathog. 2022. PMID: 35881621 Free PMC article.
-
The ASRG database: identification and survey of Arabidopsis thaliana genes involved in pre-mRNA splicing.Genome Biol. 2004;5(12):R102. doi: 10.1186/gb-2004-5-12-r102. Epub 2004 Nov 29. Genome Biol. 2004. PMID: 15575968 Free PMC article.
-
A single ancient origin for prototypical serine/arginine-rich splicing factors.Plant Physiol. 2012 Feb;158(2):546-60. doi: 10.1104/pp.111.189019. Epub 2011 Dec 12. Plant Physiol. 2012. PMID: 22158759 Free PMC article.
-
Two alternatively spliced isoforms of the Arabidopsis SR45 protein have distinct roles during normal plant development.Plant Physiol. 2009 Jul;150(3):1450-8. doi: 10.1104/pp.109.138180. Epub 2009 Apr 29. Plant Physiol. 2009. PMID: 19403727 Free PMC article.
References
Publication types
MeSH terms
Substances
Associated data
- Actions
- Actions
LinkOut - more resources
Full Text Sources
Molecular Biology Databases
Research Materials