Physical mapping of origins of replication in the fission yeast Schizosaccharomyces pombe
- PMID: 7803852
- PMCID: PMC301105
- DOI: 10.1091/mbc.5.8.839
Physical mapping of origins of replication in the fission yeast Schizosaccharomyces pombe
Abstract
We isolated four fragments from the Schizosaccharomyces pombe genome that mediate autonomous replication. A two-dimensional gel analysis revealed that in each case initiation could be mapped to within the S. pombe sequences. In three of the fragments, initiation could be mapped to one discrete location. In the fourth fragment, subcloning and two-dimensional gel analysis suggested that two discrete origins of replication were located within 3 kb of each other. When in proximity, usually only one of these origins fired, suggesting origin interference. Two-dimensional gel analysis of the four origin fragments at their genomic locations demonstrated that each is used in the chromosomes, but in only a subset of cells or cell divisions. The S. pombe genome appears to contain many discrete origins, not all of which fire in any given cell and some of which are closely spaced. Not I/Sfi I mapping of the five origins from this and a previous study indicates that they are randomly distributed throughout the genome and appear to be representative of chromosomal origins of replication in this organism. We compare the features of S. pombe replication origins with those of S. cerevisiae and animal cells.
Similar articles
-
High density of weak replication origins in a 75-kb region of chromosome 2 of fission yeast.Genes Cells. 2010 Jan;15(1):1-12. doi: 10.1111/j.1365-2443.2009.01363.x. Epub 2009 Dec 9. Genes Cells. 2010. PMID: 20002499
-
DNA replication origins fire stochastically in fission yeast.Mol Biol Cell. 2006 Jan;17(1):308-16. doi: 10.1091/mbc.e05-07-0657. Epub 2005 Oct 26. Mol Biol Cell. 2006. PMID: 16251353 Free PMC article.
-
Identification and characterization of a complex chromosomal replication origin in Schizosaccharomyces pombe.Chromosoma. 1992;102(1 Suppl):S7-16. doi: 10.1007/BF02451780. Chromosoma. 1992. PMID: 1291242
-
DNA replication in the fission yeast: robustness in the face of uncertainty.Yeast. 2006 Oct 15;23(13):951-62. doi: 10.1002/yea.1416. Yeast. 2006. PMID: 17072888 Review.
-
An Ancient Yeast for Young Geneticists: A Primer on the Schizosaccharomyces pombe Model System.Genetics. 2015 Oct;201(2):403-23. doi: 10.1534/genetics.115.181503. Genetics. 2015. PMID: 26447128 Free PMC article. Review.
Cited by
-
The fission yeast homologue of Orc4p binds to replication origin DNA via multiple AT-hooks.Proc Natl Acad Sci U S A. 1999 Mar 16;96(6):2656-61. doi: 10.1073/pnas.96.6.2656. Proc Natl Acad Sci U S A. 1999. PMID: 10077566 Free PMC article.
-
Genome-wide localization of pre-RC sites and identification of replication origins in fission yeast.EMBO J. 2007 Mar 7;26(5):1327-39. doi: 10.1038/sj.emboj.7601585. Epub 2007 Feb 15. EMBO J. 2007. PMID: 17304213 Free PMC article.
-
Regulation of replication timing in fission yeast.EMBO J. 2001 Nov 1;20(21):6115-26. doi: 10.1093/emboj/20.21.6115. EMBO J. 2001. PMID: 11689451 Free PMC article.
-
Identification, purification, and molecular cloning of autonomously replicating sequence-binding protein 1 from fission yeast Schizosaccharomyces pombe.Proc Natl Acad Sci U S A. 1996 Jan 9;93(1):502-7. doi: 10.1073/pnas.93.1.502. Proc Natl Acad Sci U S A. 1996. PMID: 8552670 Free PMC article.
-
Genetic analysis of an ARS element from the fission yeast Schizosaccharomyces pombe.EMBO J. 1995 Dec 15;14(24):6348-57. doi: 10.1002/j.1460-2075.1995.tb00326.x. EMBO J. 1995. PMID: 8557055 Free PMC article.
References
Publication types
MeSH terms
Substances
Grants and funding
LinkOut - more resources
Full Text Sources