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. 2023 Nov;10(1):e001942.
doi: 10.1136/bmjresp-2023-001942.

Performance evaluation of human cough annotators: optimal metrics and sex differences

Affiliations

Performance evaluation of human cough annotators: optimal metrics and sex differences

Isabel Sanchez-Olivieri et al. BMJ Open Respir Res. 2023 Nov.

Abstract

Introduction: Despite its high prevalence and significance, there is still no widely available method to quantify cough. In order to demonstrate agreement with the current gold standard of human annotation, emerging automated techniques require a robust, reproducible approach to annotation. We describe the extent to which a human annotator of cough sounds (a) agrees with herself (intralabeller or intrarater agreement) and (b) agrees with other independent labellers (interlabeller or inter-rater agreement); we go on to describe significant sex differences in cough sound length and epochs size.

Materials and methods: 24 participants wore an audiorecording smartwatch to capture 6-24 hours of continuous audio. A randomly selected sample of the whole audio was labelled twice by an expert annotator and a third time by six trained annotators. We collected 400 hours of audio and analysed 40 hours. The cough counts as well as cough seconds (any 1 s of time containing at least one cough) from different annotators were compared and summary statistics from linear and Bland-Altman analyses were used to quantify intraobserver and interobserver agreement.

Results: There was excellent intralabeller (less than two disagreements per hour monitored, Pearson's correlation 0.98) and interlabeller agreement (Pearson's correlation 0.96), using cough seconds as the unit of analysis decreased annotator discrepancies by 50% in comparison to coughs. Within this data set, it was observed that the length of cough sounds and epoch size (number of coughs per bout or attach) differed between women and men.

Conclusion: Given the decreased interobserver variability in annotation when using cough seconds (vs just coughs) we propose their use for manually annotating cough when assessing of the performance of automatic cough monitoring systems. The differences in cough sound length and epochs size may have important implications for equality in the development of cough monitoring tools.

Trial registration number: NCT05042063.

Keywords: Cough/Mechanisms/Pharmacology.

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Conflict of interest statement

Competing interests: MR, JCG, RM, LJ, MG and PS were or are employees of Hyfe and own equity in Hyfe. CCh has received consultancy fees and owns equity in Hyfe. All other authors declare no conflict of interest.

Figures

Figure 1
Figure 1
Labelling of two contiguous coughs in (A) Audacity, yellow boxes added for clarity on start and end of cough-segment labels which are below marked by yellow arrows and (B) Hyfe’s browser app.
Figure 2
Figure 2
Intraobserver agreement. Linear analysis; each dot represents one person-hour, different colours represent different labellers, dashed line is the line of perfection, blue line is the best fit (A). Intraobserver agreement. Bland-Altman analysis for absolute difference (B). Intraobserver agreement. Bland-Altman analysis for ratio of difference to average (C).
Figure 3
Figure 3
Interobserver agreement. Linear analysis; each dot represents one person-hour, different colours represent different labellers, dashed line is the line of perfection, blue line is the best fit (A). Interobserver agreement. Bland-Altman analysis for absolute difference (B). Interobserver agreement. Bland-Altman analysis for ratio of difference to average (C).
Figure 4
Figure 4
Agreement between labelling rounds and unit of analysis. Each dot represents one person-hour, different colours represent different labellers, dashed line is the line of perfection, blue line is the best fit.
Figure 5
Figure 5
Cough sound duration (in seconds) by sex of 23 patients encompassing 2137 coughs (one participant did not have any cough labels in the randomly selected segments).
Figure 6
Figure 6
Cough length distribution by sex.
Figure 7
Figure 7
Cough sound duration by diagnosis 23 patients encompassing 2137 coughs (1 participant did not have any cough labels in the randomly selected segments).
Figure 8
Figure 8
Histogram of cough-epoch sizes.
Figure 9
Figure 9
Distribution of cough epoch size by sex.
Figure 10
Figure 10
Distribution of cough epoch size by diagnosis.

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