2020 taxonomic update for phylum Negarnaviricota (Riboviria: Orthornavirae), including the large orders Bunyavirales and Mononegavirales

doi:10.1007/s00705-020-04731-2

. 2020 Dec;165(12):3023-3072.

doi: 10.1007/s00705-020-04731-2. Epub 2020 Sep 4.

2020 taxonomic update for phylum Negarnaviricota (Riboviria: Orthornavirae), including the large orders Bunyavirales and Mononegavirales

Jens H Kuhn¹, Scott Adkins², Daniela Alioto³, Sergey V Alkhovsky⁴, Gaya K Amarasinghe⁵, Simon J Anthony^{6

7}, Tatjana Avšič-Županc⁸, María A Ayllón^{9

10}, Justin Bahl¹¹, Anne Balkema-Buschmann¹², Matthew J Ballinger¹³, Tomáš Bartonička¹⁴, Christopher Basler¹⁵, Sina Bavari¹⁶, Martin Beer¹⁷, Dennis A Bente¹⁸, Éric Bergeron¹⁹, Brian H Bird²⁰, Carol Blair²¹, Kim R Blasdell²², Steven B Bradfute²³, Rachel Breyta²⁴, Thomas Briese²⁵, Paul A Brown²⁶, Ursula J Buchholz²⁷, Michael J Buchmeier²⁸, Alexander Bukreyev^{18

29}, Felicity Burt³⁰, Nihal Buzkan³¹, Charles H Calisher³², Mengji Cao^{33

34}, Inmaculada Casas³⁵, John Chamberlain³⁶, Kartik Chandran³⁷, Rémi N Charrel³⁸, Biao Chen³⁹, Michela Chiumenti⁴⁰, Il-Ryong Choi⁴¹, J Christopher S Clegg⁴², Ian Crozier⁴³, John V da Graça⁴⁴, Elena Dal Bó⁴⁵, Alberto M R Dávila⁴⁶, Juan Carlos de la Torre⁴⁷, Xavier de Lamballerie³⁸, Rik L de Swart⁴⁸, Patrick L Di Bello⁴⁹, Nicholas Di Paola⁵⁰, Francesco Di Serio⁴⁰, Ralf G Dietzgen⁵¹, Michele Digiaro⁵², Valerian V Dolja⁵³, Olga Dolnik⁵⁴, Michael A Drebot⁵⁵, Jan Felix Drexler⁵⁶, Ralf Dürrwald⁵⁷, Lucie Dufkova⁵⁸, William G Dundon⁵⁹, W Paul Duprex⁶⁰, John M Dye⁵⁰, Andrew J Easton⁶¹, Hideki Ebihara⁶², Toufic Elbeaino⁶³, Koray Ergünay⁶⁴, Jorlan Fernandes⁶⁵, Anthony R Fooks⁶⁶, Pierre B H Formenty⁶⁷, Leonie F Forth¹⁷, Ron A M Fouchier⁴⁸, Juliana Freitas-Astúa⁶⁸, Selma Gago-Zachert^{69

70}, George Fú Gāo⁷¹, María Laura García⁷², Adolfo García-Sastre⁷³, Aura R Garrison⁵⁰, Aiah Gbakima⁷⁴, Tracey Goldstein⁷⁵, Jean-Paul J Gonzalez^{76

77}, Anthony Griffiths⁷⁸, Martin H Groschup¹², Stephan Günther⁷⁹, Alexandro Guterres⁶⁵, Roy A Hall⁸⁰, John Hammond⁸¹, Mohamed Hassan⁸², Jussi Hepojoki^{83

84}, Satu Hepojoki^{83

85}, Udo Hetzel⁸⁶, Roger Hewson⁸⁷, Bernd Hoffmann⁸⁸, Seiji Hongo⁸⁹, Dirk Höper⁸⁸, Masayuki Horie⁹⁰, Holly R Hughes⁹¹, Timothy H Hyndman⁹², Amara Jambai⁹³, Rodrigo Jardim⁴⁶, Dàohóng Jiāng⁹⁴, Qi Jin^{95

96}, Gilda B Jonson⁹⁷, Sandra Junglen^{56

98}, Serpil Karadağ⁹⁹, Karen E Keller¹⁰⁰, Boris Klempa¹⁰¹, Jonas Klingström¹⁰², Gary Kobinger¹⁰³, Hideki Kondō¹⁰⁴, Eugene V Koonin¹⁰⁵, Mart Krupovic¹⁰⁶, Gael Kurath¹⁰⁷, Ivan V Kuzmin¹⁰⁸, Lies Laenen^{109

110}, Robert A Lamb^{111

112}, Amy J Lambert⁹¹, Stanley L Langevin¹¹³, Benhur Lee¹¹⁴, Elba R S Lemos⁶⁵, Eric M Leroy¹¹⁵, Dexin Li⁷¹, Jiànróng Lǐ¹¹⁶, Mifang Liang¹¹⁷, Wénwén Liú¹¹⁸, Yàn Liú¹¹⁸, Igor S Lukashevich¹¹⁹, Piet Maes⁹⁷, William Marciel de Souza¹²⁰, Marco Marklewitz^{56

98}, Sergio H Marshall¹²¹, Giovanni P Martelli¹²², Robert R Martin¹²³, Shin-Yi L Marzano¹²⁴, Sébastien Massart¹²⁵, John W McCauley¹²⁶, Nicole Mielke-Ehret¹²⁷, Angelantonio Minafra⁴⁰, Maria Minutolo³, Ali Mirazimi¹²⁸, Hans-Peter Mühlbach¹²⁷, Elke Mühlberger⁷⁸, Rayapati Naidu¹²⁹, Tomohide Natsuaki¹³⁰, Beatriz Navarro⁴⁰, José A Navarro¹³¹, Sergey V Netesov¹³², Gabriele Neumann¹³³, Norbert Nowotny^{134

135}, Márcio R T Nunes¹³⁶, Are Nylund¹³⁷, Arnfinn L Økland¹³⁷, Renata C Oliveira⁶⁵, Gustavo Palacios⁵⁰, Vicente Pallas¹³⁸, Bernadett Pályi¹³⁹, Anna Papa¹⁴⁰, Colin R Parrish¹⁴¹, Alex Pauvolid-Corrêa¹⁴², Janusz T Pawęska¹⁴³, Susan Payne¹⁴⁴, Daniel R Pérez¹⁴⁵, Florian Pfaff¹⁷, Sheli R Radoshitzky⁵⁰, Aziz-Ul Rahman¹⁴⁶, Pedro L Ramos-González¹⁴⁷, Renato O Resende¹⁴⁸, Carina A Reyes¹⁴⁹, Bertus K Rima¹⁵⁰, Víctor Romanowski¹⁵¹, Gabriel Robles Luna¹⁴⁹, Paul Rota¹⁵², Dennis Rubbenstroth¹⁷, Jonathan A Runstadler¹⁵³, Daniel Ruzek^{58

154}, Sead Sabanadzovic¹⁵⁵, Jiří Salát^{58

154}, Amadou Alpha Sall¹⁵⁶, Maria S Salvato¹⁵⁷, Kamil Sarpkaya¹⁵⁸, Takahide Sasaya¹⁵⁹, Martin Schwemmle¹⁶⁰, Muhammad Z Shabbir¹⁴⁶, Xiǎohóng Shí¹⁶¹, Zhènglì Shí¹⁶², Yukio Shirako¹⁶³, Peter Simmonds¹⁶⁴, Jana Širmarová⁵⁸, Manuela Sironi¹⁶⁵, Sophie Smither¹⁶⁶, Teemu Smura⁸³, Jin-Won Song¹⁶⁷, Kirsten M Spann¹⁶⁸, Jessica R Spengler¹⁹, Mark D Stenglein¹⁶⁹, David M Stone¹⁷⁰, Petra Straková⁵⁸, Ayato Takada¹⁷¹, Robert B Tesh²⁹, Natalie J Thornburg¹⁷², Keizō Tomonaga¹⁷³, Noël Tordo^{174

175}, Jonathan S Towner¹⁹, Massimo Turina¹⁷⁶, Ioannis Tzanetakis¹⁷⁷, Rainer G Ulrich^{178

179}, Anna Maria Vaira¹⁸⁰, Bernadette van den Hoogen¹⁸¹, Arvind Varsani^{182

183}, Nikos Vasilakis²⁹, Martin Verbeek¹⁸⁴, Victoria Wahl¹⁸⁵, Peter J Walker¹⁸⁶, Hui Wang¹¹⁸, Jianwei Wang¹⁸⁷, Xifeng Wang¹¹⁸, Lin-Fa Wang¹⁸⁸, Tàiyún Wèi¹⁸⁹, Heather Wells¹⁹⁰, Anna E Whitfield¹⁹¹, John V Williams⁶⁰, Yuri I Wolf¹⁰⁵, Zhìqiáng Wú¹⁹², Xin Yang³⁹, Xīnglóu Yáng¹⁶², Xuejie Yu¹⁹³, Natalya Yutin¹⁰⁵, F Murilo Zerbini¹⁹⁴, Tong Zhang³⁹, Yong-Zhen Zhang^{195

196}, Guohui Zhou³⁹, Xueping Zhou¹¹⁸

Affiliations

¹ Integrated Research Facility at Fort Detrick, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Fort Detrick, Frederick, MD, USA. kuhnjens@mail.nih.gov.
² United States Department of Agriculture, Agricultural Research Service, US Horticultural Research Laboratory, Fort Pierce, FL, USA.
³ Dipartimento di Agraria, Università degli Studi di Napoli Federico II, Portici, Italy.
⁴ D.I. Ivanovsky Institute of Virology of N.F. Gamaleya National Center on Epidemiology and Microbiology of Ministry of Health of Russian Federation, Moscow, Russia.
⁵ Department of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO, USA.
⁶ Mailman School of Public Health, Columbia University, New York, NY, USA.
⁷ EcoHealth Alliance, New York, NY, USA.
⁸ Ljubljana Faculty of Medicine, University of Ljubljana, Ljubljana, Slovenia.
⁹ Centro de Biotecnología y Genómica de Plantas, Universidad Politécnica de Madrid-Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria, Campus de Montegancedo, Pozuelo de Alarcón, Madrid, Spain.
¹⁰ Departamento de Biotecnología-Biología Vegetal, Escuela Técnica Superior de Ingeniería Agronómica, Alimentaria y de Biosistemas, Universidad Politécnica de Madrid, Madrid, Spain.
¹¹ Department of Infectious Diseases, Department of Epidemiology and Biostatistics, Institute of Bioinformatics, Center for Ecology of Infectious Diseases, University of Georgia, Athens, GA, USA.
¹² Friedrich-Loeffler-Institut, Federal Research Institute for Animal Health, Institute of Novel and Emerging Infectious Diseases, Greifswald-Insel Riems, Germany.
¹³ Department of Biological Sciences, Mississippi State University, Mississippi State, MS, USA.
¹⁴ Department of Botany and Zoology, Masaryk University, Brno, Czech Republic.
¹⁵ Center for Microbial Pathogenesis, Institute for Biomedical Sciences, Georgia State University, Atlanta, GA, USA.
¹⁶ Edge BioInnovation Consulting and Mgt, Frederick, MD, USA.
¹⁷ Institute of Diagnostic Virology, Friedrich-Loeffler-Institut, Greifswald-Insel Riems, Germany.
¹⁸ Galveston National Laboratory, The University of Texas, Medical Branch at Galveston, Galveston, TX, USA.
¹⁹ Viral Special Pathogens Branch, Division of High-Consequence Pathogens and Pathology, Centers for Disease Control and Prevention, Atlanta, GA, USA.
²⁰ School of Veterinary Medicine, One Health Institute, University of California, Davis, CA, USA.
²¹ Department of Microbiology, Immunology and Pathology, Colorado State University, Fort Collins, CO, USA.
²² Commonwealth Scientific and Industrial Research Organisation (CSIRO), Australian Centre for Disease Preparedness, Geelong, VIC, Australia.
²³ University of New Mexico Health Sciences Center, Albuquerque, NM, USA.
²⁴ US Geological Survey, Western Fisheries Research Center, Seattle, WA, USA.
²⁵ Department of Epidemiology, Mailman School of Public Health, Center for Infection and Immunity, Columbia University, New York, NY, USA.
²⁶ Laboratory of Ploufragan-Plouzané-Niort, French Agency for Food, Environmental and Occupational Heath Safety ANSES, Ploufragan, France.
²⁷ RNA Viruses Section, Laboratory of Infectious Diseases, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, USA.
²⁸ Department of Molecular Biology and Biochemistry, University of California, Irvine, CA, USA.
²⁹ Department of Pathology, The University of Texas Medical Branch, Galveston, TX, USA.
³⁰ Division of Virology, National Health Laboratory Service, University of the Free State, Bloemfontein, Republic of South Africa.
³¹ Department of Plant Protection, Faculty of Agriculture, Kahramanmaras Sütçü Imam University, Avsar Campus, 46060, Kahramanmaras, Turkey.
³² Colorado State University, Fort Collins, CO, USA.
³³ National Citrus Engineering Research Center, Citrus Research Institute, Southwest University, Chongqing, 400712, China.
³⁴ Academy of Agricultural Sciences, Southwest University, Chongqing, 400715, China.
³⁵ Respiratory Virus and Influenza Unit, National Microbiology Center, Instituto de Salud Carlos III, Madrid, Spain.
³⁶ Virology and Pathogenesis Group, National Infection Service, Public Health England, Porton Down, UK.
³⁷ Department of Microbiology and Immunology, Albert Einstein College of Medicine, Bronx, NY, USA.
³⁸ Unité des Virus Emergents (Aix-Marseille Univ-IRD 190-Inserm 1207-IHU Méditerranée Infection), Marseille, France.
³⁹ Guangdong Province Key Laboratory of Microbial Signals and Disease Control, College of Agriculture, South China Agricultural University, Guangdong, China.
⁴⁰ Istituto per la Protezione Sostenibile delle Piante-Consiglio Nazionale delle ricerche (Institute for Sustainable Plant Protection-National Research Council), Bari, Italy.
⁴¹ Plant Breeding Genetics and Biotechnology Division, International Rice Research Institute, Los Baños, Philippines.
⁴² Les Mandinaux, Le Grand Madieu, France.
⁴³ Clinical Monitoring Research Program Directorate, Frederick National Laboratory for Cancer Research, Frederick, MD, USA.
⁴⁴ Texas A&M University-Kingsville Citrus Center, Weslaco, TX, USA.
⁴⁵ CIDEFI. Facultad de Ciencias Agrarias y Forestales, Universidad de La Plata, La Plata, Argentina.
⁴⁶ Laboratório de Biologia Computacional e Sistemas, Fundação Oswaldo Cruz-Fiocruz, Instituto Oswaldo Cruz, Rio de Janeiro, RJ, Brasil.
⁴⁷ Department of Immunology and Microbiology IMM-6, The Scripps Research Institute, La Jolla, CA, USA.
⁴⁸ Department Viroscience, Erasmus MC University Medical Centre Rotterdam, Rotterdam, The Netherlands.
⁴⁹ Department of Botany and Plant Pathology, Oregon State University, Corvallis, OR, 97331, USA.
⁵⁰ United States Army Medical Research Institute of Infectious Diseases, Fort Detrick, Frederick, MD, USA.
⁵¹ Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, St. Lucia, QLD, Australia.
⁵² CIHEAM, Istituto Agronomico Mediterraneo di Bari, Valenzano, Italy.
⁵³ Department of Botany and Plant Pathology, Oregon State University, Corvallis, OR, USA.
⁵⁴ Institute of Virology, Philipps University Marburg, Marburg, Germany.
⁵⁵ Zoonotic Diseases and Special Pathogens, National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB, Canada.
⁵⁶ Institute of Virology, Charité-Universitätsmedizin Berlin, corporate member of Free University Berlin, Humboldt-University Berlin, and Berlin Institute of Health, Berlin, Germany.
⁵⁷ Robert Koch Institut, Berlin, Germany.
⁵⁸ Veterinary Research Institute, Brno, Czech Republic.
⁵⁹ Animal Production and Health Laboratory, Joint FAO/IAEA Division of Nuclear Techniques in Food and Agriculture, Department of Nuclear Sciences and Applications, International Atomic Energy Agency, Vienna, Austria.
⁶⁰ School of Medicine, University of Pittsburgh, Pittsburgh, PA, USA.
⁶¹ School of Life Sciences, University of Warwick, Coventry, UK.
⁶² Department of Molecular Medicine, Mayo Clinic, Rochester, MN, USA.
⁶³ Istituto Agronomico Mediterraneo di Bari, Valenzano, Italy.
⁶⁴ Virology Unit, Department of Medical Microbiology, Faculty of Medicine, Hacettepe University, Ankara, Turkey.
⁶⁵ Laboratório de Hantaviroses e Rickettsioses, Fundação Oswaldo Cruz-Fiocruz, Instituto Oswaldo Cruz, Rio de Janeiro, RJ, Brasil.
⁶⁶ Animal and Plant Health Agency, Weybridge, Surrey, UK.
⁶⁷ World Health Organization, Geneva, Switzerland.
⁶⁸ Embrapa Cassava and Fruits, Cruz das Almas, Bahia, Brazil.
⁶⁹ Institute of Biochemistry and Biotechnology, Martin Luther University Halle-Wittenberg, Halle/Saale, Germany.
⁷⁰ Department of Molecular Signal Processing, Leibniz Institute of Plant Biochemistry, Halle/Saale, Germany.
⁷¹ National Institute for Viral Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China.
⁷² Instituto de Biotecnología y Biología Molecular, Facultad de Ciencias Exactas, CONICET UNLP, La Plata, Argentina.
⁷³ Icahn School of Medicine at Mount Sinai, New York, NY, USA.
⁷⁴ Metabiota, Inc. Sierra Leone, Freetown, Sierra Leone.
⁷⁵ One Health Institute, Karen C. Drayer Wildlife Health Center, School of Veterinary Medicine, University of California, Davis, CA, USA.
⁷⁶ Department of Microbiology and Immunology, Division of Biomedical Graduate Research Organization, School of Medicine, Georgetown University, Washington, DC, 20057, USA.
⁷⁷ Centaurus Biotechnologies, CTP, Manassas, VA, USA.
⁷⁸ Department of Microbiology and National Emerging Infectious Diseases Laboratories, Boston University School of Medicine, Boston, MA, USA.
⁷⁹ Department of Virology, Bernhard-Nocht Institute for Tropical Medicine, WHO Collaborating Centre for Arboviruses and Hemorrhagic Fever Reference and Research, Hamburg, Germany.
⁸⁰ Australian Infectious Diseases Research Centre, School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, Australia.
⁸¹ United States Department of Agriculture, Agricultural Research Service, USNA, Floral and Nursery Plants Research Unit, Beltsville, MD, USA.
⁸² Department of Agricultural Botany, Faculty of Agriculture, Fayoum University, Fayoum, Egypt.
⁸³ Department of Virology, University of Helsinki, Medicum, Helsinki, Finland.
⁸⁴ Vetsuisse Faculty, Institute of Veterinary Pathology, University of Zurich, Zurich, Switzerland.
⁸⁵ Mobidiag Ltd, Espoo, Finland.
⁸⁶ Institute of Veterinary Pathology, University of Zuerich, Zurich, Switzerland.
⁸⁷ Public Health England, Porton Down, Salisbury, Wiltshire, UK.
⁸⁸ Friedrich-Loeffler-Institut, Greifswald-Insel Riems, Germany.
⁸⁹ Department of Infectious Diseases, Faculty of Medicine, Yamagata University, Yamagata, Japan.
⁹⁰ Hakubi Center for Advanced Research, Kyoto University, Kyoto, Japan.
⁹¹ Centers for Disease Control and Prevention, Fort Collins, CO, USA.
⁹² School of Veterinary Medicine, Murdoch University, Murdoch, WA, Australia.
⁹³ Ministry of Health and Sanitation, Freetown, Sierra Leone.
⁹⁴ State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, Hubei, China.
⁹⁵ Ministry of Health Key Laboratory of Systems Biology of Pathogens, Institute of Pathogen Biology, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China.
⁹⁶ Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, Hangzhou, China.
⁹⁷ Department of Agricultural Biotechnology, Center for Fungal Pathogenesis, College of Agriculture and Life Sciences, Seoul National University, Seoul, South Korea.
⁹⁸ German Center for Infection Research (DZIF), Berlin, Germany.
⁹⁹ Republic Of Turkey Ministry Of Agriculture And Forestry, Pistachio Research Institute, Gaziantep, Turkey.
¹⁰⁰ United States Department of Agriculture, Agricultural Research Service, Horticulture Crops Research Unit, Corvallis, OR, USA.
¹⁰¹ Institute of Virology, Biomedical Research Center, Slovak Academy of Sciences, Bratislava, Slovakia.
¹⁰² Department of Medicine Huddinge, Center for Infectious Medicine, Karolinska Institutet, Karolinska University Hospital, Stockholm, Sweden.
¹⁰³ Department of Microbiology, Immunology and Infectious Diseases, Université Laval, Quebec City, Canada.
¹⁰⁴ Institute of Plant Science and Resources, Okayama University, Kurashiki, Japan.
¹⁰⁵ National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA.
¹⁰⁶ Archaeal Virology Unit, Institut Pasteur, Paris, France.
¹⁰⁷ US Geological Survey Western Fisheries Research Center, Seattle, WA, USA.
¹⁰⁸ US Department of Agriculture, Animal and Plant Health Inspection, National Veterinary Services Laboratories, Diagnostic Virology Laboratory, Ames, USA.
¹⁰⁹ Zoonotic Infectious Diseases Unit, KU Leuven, Rega Institute, Leuven, Belgium.
¹¹⁰ Department of Laboratory Medicine, University Hospitals Leuven, Leuven, Belgium.
¹¹¹ Department of Molecular Biosciences, Northwestern University, Evanston, IL, USA.
¹¹² Howard Hughes Medical Institute, Northwestern University, Evanston, IL, USA.
¹¹³ Department of Microbiology, University of Washington, Washington, USA.
¹¹⁴ Department of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
¹¹⁵ MIVEGEC (IRD-CNRS-Montpellier university) Unit, French National Research Institute for Sustainable Development (IRD), Montpellier, France.
¹¹⁶ Department of Veterinary Biosciences, College of Veterinary Medicine, The Ohio State University, Columbus, OH, USA.
¹¹⁷ Key Laboratory for Medical Virology, NHFPC, National Institute for Viral Disease Control and Prevention, Beijing, China.
¹¹⁸ State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, China.
¹¹⁹ Department of Pharmacology and Toxicology, School of Medicine, The Center for Predictive Medicine for Biodefense and Emerging Infectious Diseases, University of Louisville, Louisville, KY, USA.
¹²⁰ Virology Research Center, University of São Paulo, Ribeirão Preto, Brazil.
¹²¹ Pontificia Universidad Católica de Valparaíso, Campus Curauma, Valparaíso, Chile.
¹²² Department of Plant, Soil and Food Sciences, University "Aldo Moro", Bari, Italy.
¹²³ United States Department of Agriculture, Horticultural Crops Research Unit, Corvallis, OR, USA.
¹²⁴ Department of Biology and Microbiology, Department of Plant Sciences, South Dakota State University, Brookings, SD, USA.
¹²⁵ Gembloux Agro-Bio Tech, TERRA, Plant Pathology Laboratory, Liège University, Liège, Belgium.
¹²⁶ Worldwide Influenza Centre, Francis Crick Institute, London, UK.
¹²⁷ Biocentre Klein Flottbek, University of Hamburg, Hamburg, Germany.
¹²⁸ Folkhalsomyndigheten, Stockholm, Sweden.
¹²⁹ Department of Plant Pathology, Irrigated Agricultural Research and Extension Center, Washington State University, Prosser, WA, USA.
¹³⁰ School of Agriculture, Utsunomiya University, Utsunomiya, Tochigi, Japan.
¹³¹ Instituto de Biología Molecular y Celular de Plantas, Universitat Politècnica de València-Consejo Superior de Investigaciones Científicas, Valencia, Spain.
¹³² Novosibirsk State University, Novosibirsk, Novosibirsk Oblast, Russia.
¹³³ Department of Pathobiological Sciences, Influenza Research Institute, University of Wisconsin-Madison, Madison, USA.
¹³⁴ Institute of Virology, University of Veterinary Medicine Vienna, Vienna, Austria.
¹³⁵ College of Medicine, Mohammed Bin Rashid University of Medicine and Health Sciences, Dubai, United Arab Emirates.
¹³⁶ Evandro Chagas Institute, Ministry of Health, Pará, Brazil.
¹³⁷ Fish Disease Research Group, Department of Biological Sciences, University of Bergen, Bergen, Norway.
¹³⁸ Instituto de Biología Molecular y Celular de Plantas (IBMCP), Consejo Superior de Investigaciones Cientificas-Universidad Politécnica de Valencia, Valencia, Spain.
¹³⁹ National Biosafety Laboratory, National Public Health Center, Budapest, Hungary.
¹⁴⁰ National Reference Centre for Arboviruses and Haemorrhagic Fever Viruses, Department of Microbiology, Medical School, Aristotle University of Thessaloniki, Thessaloníki, Greece.
¹⁴¹ College of Veterinary Medicine, Baker Institute for Animal Health, Cornell University, Ithaca, NY, USA.
¹⁴² Department of Veterinary Integrated Biosciences and Department of Entomology, Texas A&M University, College Station, USA.
¹⁴³ Center for Emerging Zoonotic and Parasitic Diseases, National Institute for Communicable Diseases of the National Health Laboratory Service, Sandringham-Johannesburg, Gauteng, South Africa.
¹⁴⁴ Department of Veterinary Pathobiology, College of Veterinary Medicine and Biomedical Sciences, Texas A&M University, College Station, TX, USA.
¹⁴⁵ Department of Population Health, College of Veterinary Medicine, University of Georgia, Athens, GA, USA.
¹⁴⁶ Institute of Microbiology, University of Veterinary and Animal Sciences, Lahore, Pakistan.
¹⁴⁷ Laboratório de Biologia Molecular Aplicada, Instituto Biológico, São Paulo, SP, Brazil.
¹⁴⁸ Departamento de Biologia Celular, Universidade de Brasília, Brasília, Brazil.
¹⁴⁹ Instituto de Biotecnología y Biología Molecular, CCT-La Plata, CONICET-UNLP, La Plata, Buenos Aires, Argentina.
¹⁵⁰ Centre for Experimental Medicine, School of Medicine, Dentistry and Biomedical Sciences, The Queen's University of Belfast, Belfast, Northern Ireland, UK.
¹⁵¹ Instituto de Biotecnología y Biología Molecular, Centro Cientifico Technológico-La Plata, Consejo Nacional de Investigaciones Científico Tecnológico-Universidad Nacional de La Plata, La Plata, Argentina.
¹⁵² National Center for Immunization and Respiratory Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA.
¹⁵³ Department of Infectious Disease and Global Health, Tufts University Cummings School of Veterinary Medicine, 200 Westboro Road, North Grafton, MA, 01536, USA.
¹⁵⁴ Institute of Parasitology, Biology Centre of the Czech Academy of Sciences, Branisovska 31, 37005, Ceske Budejovice, Czech Republic.
¹⁵⁵ Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Mississippi State, MS, USA.
¹⁵⁶ Institut Pasteur de Dakar, Dakar, Senegal.
¹⁵⁷ Institute of Human Virology, University of Maryland School of Medicine, Baltimore, MD, USA.
¹⁵⁸ Department of Forestry Engineering, Faculty of Forestry, Karabuk University (UNIKA), Karabük, Turkey.
¹⁵⁹ Western Region Agricultural Research Center, National Agriculture and Food Research Organization, Fukuyama, Japan.
¹⁶⁰ Faculty of Medicine, University Medical Center-University Freiburg, Freiburg, Germany.
¹⁶¹ MRC-University of Glasgow Centre for Virus Research, Glasgow, Scotland, UK.
¹⁶² CAS Key Laboratory of Special Pathogens, Wuhan Institute of Virology, Center for Biosafety Mega-Science, Chinese Academy of Sciences, Wuhan, Hubei, People's Republic of China.
¹⁶³ Asian Center for Bioresources and Environmental Sciences, University of Tokyo, Tokyo, Japan.
¹⁶⁴ Nuffield Department of Medicine, University of Oxford, Oxford, UK.
¹⁶⁵ Bioinformatics Unit, Scientific Institute IRCCS "E. Medea", Bosisio Parini, Italy.
¹⁶⁶ CBR Division, Dstl, Porton Down, Salisbury, Wiltshire, UK.
¹⁶⁷ Department of Microbiology, College of Medicine, Korea University, Seoul, Republic of Korea.
¹⁶⁸ School of Biomedical Sciences, Faculty of Health, Queensland University of Technology, Brisbane, QLD, Australia.
¹⁶⁹ Department of Microbiology, Immunology, and Pathology, College of Veterinary Medicine and Biomedical Sciences, Colorado State University, Fort Collins, CO, USA.
¹⁷⁰ Centre for Environment, Fisheries and Aquaculture Science, Weymouth, Dorset, UK.
¹⁷¹ Division of Global Epidemiology, Research Center for Zoonosis Control, Hokkaido University, Sapporo, Japan.
¹⁷² Centers for Disease Control and Prevention, Atlanta, GA, USA.
¹⁷³ Institute for Frontier Life and Medical Sciences (inFront), Kyoto University, Kyoto, Japan.
¹⁷⁴ Institut Pasteur, Unité des Stratégies Antivirales, WHO Collaborative Centre for Viral Haemorrhagic Fevers and Arboviruses, OIE Reference Laboratory for RVFV and CCHFV, Paris, France.
¹⁷⁵ Institut Pasteur de Guinée, Conakry, Guinea.
¹⁷⁶ Institute for Sustainable Plant Protection, National Research Council of Italy (CNR), Strada delle Cacce 73, 10135, Turin, Italy.
¹⁷⁷ Division of Agriculture, Department of Entomology and Plant Pathology, University of Arkansas System, Fayetteville, AR, 72701, USA.
¹⁷⁸ Friedrich-Loeffler-Institut, Federal Research Institute for Animal Health, Institute of Novel and Emerging Infectious Diseases, Südufer 10, 17493, Greifswald-Insel Riems, Germany.
¹⁷⁹ German Center of Infection Research (DZIF), Partner site Hamburg-Lübeck-Borstel-Insel Riems, Greifswald-Insel Riems, Germany.
¹⁸⁰ Institute for Sustainable Plant Protection, National Research Council of Italy (IPSP-CNR), 73 Strada delle Cacce, 10135, Turin, Italy.
¹⁸¹ Department of Viroscience, Erasmus MC University Medical Centre Rotterdam, Rotterdam, The Netherlands.
¹⁸² The Biodesign Center for Fundamental and Applied Microbiomics, Center for Evolution and Medicine School of Life Sciences, Arizona State University, Tempe, AZ, USA.
¹⁸³ Structural Biology Research Unit, Department of Clinical Laboratory Sciences, University of Cape Town, Observatory, Cape Town, South Africa.
¹⁸⁴ Wageningen University and Research, Biointeractions and Plant Health, Wageningen, The Netherlands.
¹⁸⁵ National Biodefense Analysis and Countermeasures Center, Fort Detrick, Frederick, MD, USA.
¹⁸⁶ School of Biological Sciences, University of Queensland, St. Lucia, Queensland, Australia.
¹⁸⁷ NHC Key Laboratory of Systems Biology of Pathogens and Christophe Mérieux Laboratory, IPB-Fondation Mérieux, Institute of Pathogen Biology, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China.
¹⁸⁸ Programme in Emerging Infectious Diseases, Duke-NUS Medical School, Singapore, Singapore.
¹⁸⁹ Fujian Province Key Laboratory of Plant Virology, Institute of Plant Virology, Fujian Agriculture and Forestry University, Fuzhou, Fujian, China.
¹⁹⁰ Mailman School of Public Health, Center for Infection and Immunity, Columbia University, New York, USA.
¹⁹¹ Department of Entomology and Plant Pathology, North Carolina State University, Raleigh, NC, USA.
¹⁹² MOH Key Laboratory of Systems Biology of Pathogens, IPB, CAMS, Beijing, China.
¹⁹³ Wuhan University School of Health Sciences, Wuhan, China.
¹⁹⁴ Departamento de Fitopatologia, Instituto de Biotecnologia Aplicada à Agropecuária, Universidade Federal de Viçosa, Viçosa, Minas Gerais, Brazil.
¹⁹⁵ National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Changping, Beijing, China.
¹⁹⁶ Shanghai Public Health Clinical Center, Institutes of Biomedical Sciences, Fudan University, Shanghai, China.

PMID: 32888050
PMCID: PMC7606449
DOI: 10.1007/s00705-020-04731-2

2020 taxonomic update for phylum Negarnaviricota (Riboviria: Orthornavirae), including the large orders Bunyavirales and Mononegavirales

Jens H Kuhn et al. Arch Virol. 2020 Dec.

. 2020 Dec;165(12):3023-3072.

doi: 10.1007/s00705-020-04731-2. Epub 2020 Sep 4.

Authors

Affiliations

¹ Integrated Research Facility at Fort Detrick, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Fort Detrick, Frederick, MD, USA. kuhnjens@mail.nih.gov.
² United States Department of Agriculture, Agricultural Research Service, US Horticultural Research Laboratory, Fort Pierce, FL, USA.
³ Dipartimento di Agraria, Università degli Studi di Napoli Federico II, Portici, Italy.
⁴ D.I. Ivanovsky Institute of Virology of N.F. Gamaleya National Center on Epidemiology and Microbiology of Ministry of Health of Russian Federation, Moscow, Russia.
⁵ Department of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO, USA.
⁶ Mailman School of Public Health, Columbia University, New York, NY, USA.
⁷ EcoHealth Alliance, New York, NY, USA.
⁸ Ljubljana Faculty of Medicine, University of Ljubljana, Ljubljana, Slovenia.
⁹ Centro de Biotecnología y Genómica de Plantas, Universidad Politécnica de Madrid-Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria, Campus de Montegancedo, Pozuelo de Alarcón, Madrid, Spain.
¹⁰ Departamento de Biotecnología-Biología Vegetal, Escuela Técnica Superior de Ingeniería Agronómica, Alimentaria y de Biosistemas, Universidad Politécnica de Madrid, Madrid, Spain.
¹¹ Department of Infectious Diseases, Department of Epidemiology and Biostatistics, Institute of Bioinformatics, Center for Ecology of Infectious Diseases, University of Georgia, Athens, GA, USA.
¹² Friedrich-Loeffler-Institut, Federal Research Institute for Animal Health, Institute of Novel and Emerging Infectious Diseases, Greifswald-Insel Riems, Germany.
¹³ Department of Biological Sciences, Mississippi State University, Mississippi State, MS, USA.
¹⁴ Department of Botany and Zoology, Masaryk University, Brno, Czech Republic.
¹⁵ Center for Microbial Pathogenesis, Institute for Biomedical Sciences, Georgia State University, Atlanta, GA, USA.
¹⁶ Edge BioInnovation Consulting and Mgt, Frederick, MD, USA.
¹⁷ Institute of Diagnostic Virology, Friedrich-Loeffler-Institut, Greifswald-Insel Riems, Germany.
¹⁸ Galveston National Laboratory, The University of Texas, Medical Branch at Galveston, Galveston, TX, USA.
¹⁹ Viral Special Pathogens Branch, Division of High-Consequence Pathogens and Pathology, Centers for Disease Control and Prevention, Atlanta, GA, USA.
²⁰ School of Veterinary Medicine, One Health Institute, University of California, Davis, CA, USA.
²¹ Department of Microbiology, Immunology and Pathology, Colorado State University, Fort Collins, CO, USA.
²² Commonwealth Scientific and Industrial Research Organisation (CSIRO), Australian Centre for Disease Preparedness, Geelong, VIC, Australia.
²³ University of New Mexico Health Sciences Center, Albuquerque, NM, USA.
²⁴ US Geological Survey, Western Fisheries Research Center, Seattle, WA, USA.
²⁵ Department of Epidemiology, Mailman School of Public Health, Center for Infection and Immunity, Columbia University, New York, NY, USA.
²⁶ Laboratory of Ploufragan-Plouzané-Niort, French Agency for Food, Environmental and Occupational Heath Safety ANSES, Ploufragan, France.
²⁷ RNA Viruses Section, Laboratory of Infectious Diseases, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, USA.
²⁸ Department of Molecular Biology and Biochemistry, University of California, Irvine, CA, USA.
²⁹ Department of Pathology, The University of Texas Medical Branch, Galveston, TX, USA.
³⁰ Division of Virology, National Health Laboratory Service, University of the Free State, Bloemfontein, Republic of South Africa.
³¹ Department of Plant Protection, Faculty of Agriculture, Kahramanmaras Sütçü Imam University, Avsar Campus, 46060, Kahramanmaras, Turkey.
³² Colorado State University, Fort Collins, CO, USA.
³³ National Citrus Engineering Research Center, Citrus Research Institute, Southwest University, Chongqing, 400712, China.
³⁴ Academy of Agricultural Sciences, Southwest University, Chongqing, 400715, China.
³⁵ Respiratory Virus and Influenza Unit, National Microbiology Center, Instituto de Salud Carlos III, Madrid, Spain.
³⁶ Virology and Pathogenesis Group, National Infection Service, Public Health England, Porton Down, UK.
³⁷ Department of Microbiology and Immunology, Albert Einstein College of Medicine, Bronx, NY, USA.
³⁸ Unité des Virus Emergents (Aix-Marseille Univ-IRD 190-Inserm 1207-IHU Méditerranée Infection), Marseille, France.
³⁹ Guangdong Province Key Laboratory of Microbial Signals and Disease Control, College of Agriculture, South China Agricultural University, Guangdong, China.
⁴⁰ Istituto per la Protezione Sostenibile delle Piante-Consiglio Nazionale delle ricerche (Institute for Sustainable Plant Protection-National Research Council), Bari, Italy.
⁴¹ Plant Breeding Genetics and Biotechnology Division, International Rice Research Institute, Los Baños, Philippines.
⁴² Les Mandinaux, Le Grand Madieu, France.
⁴³ Clinical Monitoring Research Program Directorate, Frederick National Laboratory for Cancer Research, Frederick, MD, USA.
⁴⁴ Texas A&M University-Kingsville Citrus Center, Weslaco, TX, USA.
⁴⁵ CIDEFI. Facultad de Ciencias Agrarias y Forestales, Universidad de La Plata, La Plata, Argentina.
⁴⁶ Laboratório de Biologia Computacional e Sistemas, Fundação Oswaldo Cruz-Fiocruz, Instituto Oswaldo Cruz, Rio de Janeiro, RJ, Brasil.
⁴⁷ Department of Immunology and Microbiology IMM-6, The Scripps Research Institute, La Jolla, CA, USA.
⁴⁸ Department Viroscience, Erasmus MC University Medical Centre Rotterdam, Rotterdam, The Netherlands.
⁴⁹ Department of Botany and Plant Pathology, Oregon State University, Corvallis, OR, 97331, USA.
⁵⁰ United States Army Medical Research Institute of Infectious Diseases, Fort Detrick, Frederick, MD, USA.
⁵¹ Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, St. Lucia, QLD, Australia.
⁵² CIHEAM, Istituto Agronomico Mediterraneo di Bari, Valenzano, Italy.
⁵³ Department of Botany and Plant Pathology, Oregon State University, Corvallis, OR, USA.
⁵⁴ Institute of Virology, Philipps University Marburg, Marburg, Germany.
⁵⁵ Zoonotic Diseases and Special Pathogens, National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB, Canada.
⁵⁶ Institute of Virology, Charité-Universitätsmedizin Berlin, corporate member of Free University Berlin, Humboldt-University Berlin, and Berlin Institute of Health, Berlin, Germany.
⁵⁷ Robert Koch Institut, Berlin, Germany.
⁵⁸ Veterinary Research Institute, Brno, Czech Republic.
⁵⁹ Animal Production and Health Laboratory, Joint FAO/IAEA Division of Nuclear Techniques in Food and Agriculture, Department of Nuclear Sciences and Applications, International Atomic Energy Agency, Vienna, Austria.
⁶⁰ School of Medicine, University of Pittsburgh, Pittsburgh, PA, USA.
⁶¹ School of Life Sciences, University of Warwick, Coventry, UK.
⁶² Department of Molecular Medicine, Mayo Clinic, Rochester, MN, USA.
⁶³ Istituto Agronomico Mediterraneo di Bari, Valenzano, Italy.
⁶⁴ Virology Unit, Department of Medical Microbiology, Faculty of Medicine, Hacettepe University, Ankara, Turkey.
⁶⁵ Laboratório de Hantaviroses e Rickettsioses, Fundação Oswaldo Cruz-Fiocruz, Instituto Oswaldo Cruz, Rio de Janeiro, RJ, Brasil.
⁶⁶ Animal and Plant Health Agency, Weybridge, Surrey, UK.
⁶⁷ World Health Organization, Geneva, Switzerland.
⁶⁸ Embrapa Cassava and Fruits, Cruz das Almas, Bahia, Brazil.
⁶⁹ Institute of Biochemistry and Biotechnology, Martin Luther University Halle-Wittenberg, Halle/Saale, Germany.
⁷⁰ Department of Molecular Signal Processing, Leibniz Institute of Plant Biochemistry, Halle/Saale, Germany.
⁷¹ National Institute for Viral Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China.
⁷² Instituto de Biotecnología y Biología Molecular, Facultad de Ciencias Exactas, CONICET UNLP, La Plata, Argentina.
⁷³ Icahn School of Medicine at Mount Sinai, New York, NY, USA.
⁷⁴ Metabiota, Inc. Sierra Leone, Freetown, Sierra Leone.
⁷⁵ One Health Institute, Karen C. Drayer Wildlife Health Center, School of Veterinary Medicine, University of California, Davis, CA, USA.
⁷⁶ Department of Microbiology and Immunology, Division of Biomedical Graduate Research Organization, School of Medicine, Georgetown University, Washington, DC, 20057, USA.
⁷⁷ Centaurus Biotechnologies, CTP, Manassas, VA, USA.
⁷⁸ Department of Microbiology and National Emerging Infectious Diseases Laboratories, Boston University School of Medicine, Boston, MA, USA.
⁷⁹ Department of Virology, Bernhard-Nocht Institute for Tropical Medicine, WHO Collaborating Centre for Arboviruses and Hemorrhagic Fever Reference and Research, Hamburg, Germany.
⁸⁰ Australian Infectious Diseases Research Centre, School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, Australia.
⁸¹ United States Department of Agriculture, Agricultural Research Service, USNA, Floral and Nursery Plants Research Unit, Beltsville, MD, USA.
⁸² Department of Agricultural Botany, Faculty of Agriculture, Fayoum University, Fayoum, Egypt.
⁸³ Department of Virology, University of Helsinki, Medicum, Helsinki, Finland.
⁸⁴ Vetsuisse Faculty, Institute of Veterinary Pathology, University of Zurich, Zurich, Switzerland.
⁸⁵ Mobidiag Ltd, Espoo, Finland.
⁸⁶ Institute of Veterinary Pathology, University of Zuerich, Zurich, Switzerland.
⁸⁷ Public Health England, Porton Down, Salisbury, Wiltshire, UK.
⁸⁸ Friedrich-Loeffler-Institut, Greifswald-Insel Riems, Germany.
⁸⁹ Department of Infectious Diseases, Faculty of Medicine, Yamagata University, Yamagata, Japan.
⁹⁰ Hakubi Center for Advanced Research, Kyoto University, Kyoto, Japan.
⁹¹ Centers for Disease Control and Prevention, Fort Collins, CO, USA.
⁹² School of Veterinary Medicine, Murdoch University, Murdoch, WA, Australia.
⁹³ Ministry of Health and Sanitation, Freetown, Sierra Leone.
⁹⁴ State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, Hubei, China.
⁹⁵ Ministry of Health Key Laboratory of Systems Biology of Pathogens, Institute of Pathogen Biology, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China.
⁹⁶ Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, Hangzhou, China.
⁹⁷ Department of Agricultural Biotechnology, Center for Fungal Pathogenesis, College of Agriculture and Life Sciences, Seoul National University, Seoul, South Korea.
⁹⁸ German Center for Infection Research (DZIF), Berlin, Germany.
⁹⁹ Republic Of Turkey Ministry Of Agriculture And Forestry, Pistachio Research Institute, Gaziantep, Turkey.
¹⁰⁰ United States Department of Agriculture, Agricultural Research Service, Horticulture Crops Research Unit, Corvallis, OR, USA.
¹⁰¹ Institute of Virology, Biomedical Research Center, Slovak Academy of Sciences, Bratislava, Slovakia.
¹⁰² Department of Medicine Huddinge, Center for Infectious Medicine, Karolinska Institutet, Karolinska University Hospital, Stockholm, Sweden.
¹⁰³ Department of Microbiology, Immunology and Infectious Diseases, Université Laval, Quebec City, Canada.
¹⁰⁴ Institute of Plant Science and Resources, Okayama University, Kurashiki, Japan.
¹⁰⁵ National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA.
¹⁰⁶ Archaeal Virology Unit, Institut Pasteur, Paris, France.
¹⁰⁷ US Geological Survey Western Fisheries Research Center, Seattle, WA, USA.
¹⁰⁸ US Department of Agriculture, Animal and Plant Health Inspection, National Veterinary Services Laboratories, Diagnostic Virology Laboratory, Ames, USA.
¹⁰⁹ Zoonotic Infectious Diseases Unit, KU Leuven, Rega Institute, Leuven, Belgium.
¹¹⁰ Department of Laboratory Medicine, University Hospitals Leuven, Leuven, Belgium.
¹¹¹ Department of Molecular Biosciences, Northwestern University, Evanston, IL, USA.
¹¹² Howard Hughes Medical Institute, Northwestern University, Evanston, IL, USA.
¹¹³ Department of Microbiology, University of Washington, Washington, USA.
¹¹⁴ Department of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
¹¹⁵ MIVEGEC (IRD-CNRS-Montpellier university) Unit, French National Research Institute for Sustainable Development (IRD), Montpellier, France.
¹¹⁶ Department of Veterinary Biosciences, College of Veterinary Medicine, The Ohio State University, Columbus, OH, USA.
¹¹⁷ Key Laboratory for Medical Virology, NHFPC, National Institute for Viral Disease Control and Prevention, Beijing, China.
¹¹⁸ State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, China.
¹¹⁹ Department of Pharmacology and Toxicology, School of Medicine, The Center for Predictive Medicine for Biodefense and Emerging Infectious Diseases, University of Louisville, Louisville, KY, USA.
¹²⁰ Virology Research Center, University of São Paulo, Ribeirão Preto, Brazil.
¹²¹ Pontificia Universidad Católica de Valparaíso, Campus Curauma, Valparaíso, Chile.
¹²² Department of Plant, Soil and Food Sciences, University "Aldo Moro", Bari, Italy.
¹²³ United States Department of Agriculture, Horticultural Crops Research Unit, Corvallis, OR, USA.
¹²⁴ Department of Biology and Microbiology, Department of Plant Sciences, South Dakota State University, Brookings, SD, USA.
¹²⁵ Gembloux Agro-Bio Tech, TERRA, Plant Pathology Laboratory, Liège University, Liège, Belgium.
¹²⁶ Worldwide Influenza Centre, Francis Crick Institute, London, UK.
¹²⁷ Biocentre Klein Flottbek, University of Hamburg, Hamburg, Germany.
¹²⁸ Folkhalsomyndigheten, Stockholm, Sweden.
¹²⁹ Department of Plant Pathology, Irrigated Agricultural Research and Extension Center, Washington State University, Prosser, WA, USA.
¹³⁰ School of Agriculture, Utsunomiya University, Utsunomiya, Tochigi, Japan.
¹³¹ Instituto de Biología Molecular y Celular de Plantas, Universitat Politècnica de València-Consejo Superior de Investigaciones Científicas, Valencia, Spain.
¹³² Novosibirsk State University, Novosibirsk, Novosibirsk Oblast, Russia.
¹³³ Department of Pathobiological Sciences, Influenza Research Institute, University of Wisconsin-Madison, Madison, USA.
¹³⁴ Institute of Virology, University of Veterinary Medicine Vienna, Vienna, Austria.
¹³⁵ College of Medicine, Mohammed Bin Rashid University of Medicine and Health Sciences, Dubai, United Arab Emirates.
¹³⁶ Evandro Chagas Institute, Ministry of Health, Pará, Brazil.
¹³⁷ Fish Disease Research Group, Department of Biological Sciences, University of Bergen, Bergen, Norway.
¹³⁸ Instituto de Biología Molecular y Celular de Plantas (IBMCP), Consejo Superior de Investigaciones Cientificas-Universidad Politécnica de Valencia, Valencia, Spain.
¹³⁹ National Biosafety Laboratory, National Public Health Center, Budapest, Hungary.
¹⁴⁰ National Reference Centre for Arboviruses and Haemorrhagic Fever Viruses, Department of Microbiology, Medical School, Aristotle University of Thessaloniki, Thessaloníki, Greece.
¹⁴¹ College of Veterinary Medicine, Baker Institute for Animal Health, Cornell University, Ithaca, NY, USA.
¹⁴² Department of Veterinary Integrated Biosciences and Department of Entomology, Texas A&M University, College Station, USA.
¹⁴³ Center for Emerging Zoonotic and Parasitic Diseases, National Institute for Communicable Diseases of the National Health Laboratory Service, Sandringham-Johannesburg, Gauteng, South Africa.
¹⁴⁴ Department of Veterinary Pathobiology, College of Veterinary Medicine and Biomedical Sciences, Texas A&M University, College Station, TX, USA.
¹⁴⁵ Department of Population Health, College of Veterinary Medicine, University of Georgia, Athens, GA, USA.
¹⁴⁶ Institute of Microbiology, University of Veterinary and Animal Sciences, Lahore, Pakistan.
¹⁴⁷ Laboratório de Biologia Molecular Aplicada, Instituto Biológico, São Paulo, SP, Brazil.
¹⁴⁸ Departamento de Biologia Celular, Universidade de Brasília, Brasília, Brazil.
¹⁴⁹ Instituto de Biotecnología y Biología Molecular, CCT-La Plata, CONICET-UNLP, La Plata, Buenos Aires, Argentina.
¹⁵⁰ Centre for Experimental Medicine, School of Medicine, Dentistry and Biomedical Sciences, The Queen's University of Belfast, Belfast, Northern Ireland, UK.
¹⁵¹ Instituto de Biotecnología y Biología Molecular, Centro Cientifico Technológico-La Plata, Consejo Nacional de Investigaciones Científico Tecnológico-Universidad Nacional de La Plata, La Plata, Argentina.
¹⁵² National Center for Immunization and Respiratory Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA.
¹⁵³ Department of Infectious Disease and Global Health, Tufts University Cummings School of Veterinary Medicine, 200 Westboro Road, North Grafton, MA, 01536, USA.
¹⁵⁴ Institute of Parasitology, Biology Centre of the Czech Academy of Sciences, Branisovska 31, 37005, Ceske Budejovice, Czech Republic.
¹⁵⁵ Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Mississippi State, MS, USA.
¹⁵⁶ Institut Pasteur de Dakar, Dakar, Senegal.
¹⁵⁷ Institute of Human Virology, University of Maryland School of Medicine, Baltimore, MD, USA.
¹⁵⁸ Department of Forestry Engineering, Faculty of Forestry, Karabuk University (UNIKA), Karabük, Turkey.
¹⁵⁹ Western Region Agricultural Research Center, National Agriculture and Food Research Organization, Fukuyama, Japan.
¹⁶⁰ Faculty of Medicine, University Medical Center-University Freiburg, Freiburg, Germany.
¹⁶¹ MRC-University of Glasgow Centre for Virus Research, Glasgow, Scotland, UK.
¹⁶² CAS Key Laboratory of Special Pathogens, Wuhan Institute of Virology, Center for Biosafety Mega-Science, Chinese Academy of Sciences, Wuhan, Hubei, People's Republic of China.
¹⁶³ Asian Center for Bioresources and Environmental Sciences, University of Tokyo, Tokyo, Japan.
¹⁶⁴ Nuffield Department of Medicine, University of Oxford, Oxford, UK.
¹⁶⁵ Bioinformatics Unit, Scientific Institute IRCCS "E. Medea", Bosisio Parini, Italy.
¹⁶⁶ CBR Division, Dstl, Porton Down, Salisbury, Wiltshire, UK.
¹⁶⁷ Department of Microbiology, College of Medicine, Korea University, Seoul, Republic of Korea.
¹⁶⁸ School of Biomedical Sciences, Faculty of Health, Queensland University of Technology, Brisbane, QLD, Australia.
¹⁶⁹ Department of Microbiology, Immunology, and Pathology, College of Veterinary Medicine and Biomedical Sciences, Colorado State University, Fort Collins, CO, USA.
¹⁷⁰ Centre for Environment, Fisheries and Aquaculture Science, Weymouth, Dorset, UK.
¹⁷¹ Division of Global Epidemiology, Research Center for Zoonosis Control, Hokkaido University, Sapporo, Japan.
¹⁷² Centers for Disease Control and Prevention, Atlanta, GA, USA.
¹⁷³ Institute for Frontier Life and Medical Sciences (inFront), Kyoto University, Kyoto, Japan.
¹⁷⁴ Institut Pasteur, Unité des Stratégies Antivirales, WHO Collaborative Centre for Viral Haemorrhagic Fevers and Arboviruses, OIE Reference Laboratory for RVFV and CCHFV, Paris, France.
¹⁷⁵ Institut Pasteur de Guinée, Conakry, Guinea.
¹⁷⁶ Institute for Sustainable Plant Protection, National Research Council of Italy (CNR), Strada delle Cacce 73, 10135, Turin, Italy.
¹⁷⁷ Division of Agriculture, Department of Entomology and Plant Pathology, University of Arkansas System, Fayetteville, AR, 72701, USA.
¹⁷⁸ Friedrich-Loeffler-Institut, Federal Research Institute for Animal Health, Institute of Novel and Emerging Infectious Diseases, Südufer 10, 17493, Greifswald-Insel Riems, Germany.
¹⁷⁹ German Center of Infection Research (DZIF), Partner site Hamburg-Lübeck-Borstel-Insel Riems, Greifswald-Insel Riems, Germany.
¹⁸⁰ Institute for Sustainable Plant Protection, National Research Council of Italy (IPSP-CNR), 73 Strada delle Cacce, 10135, Turin, Italy.
¹⁸¹ Department of Viroscience, Erasmus MC University Medical Centre Rotterdam, Rotterdam, The Netherlands.
¹⁸² The Biodesign Center for Fundamental and Applied Microbiomics, Center for Evolution and Medicine School of Life Sciences, Arizona State University, Tempe, AZ, USA.
¹⁸³ Structural Biology Research Unit, Department of Clinical Laboratory Sciences, University of Cape Town, Observatory, Cape Town, South Africa.
¹⁸⁴ Wageningen University and Research, Biointeractions and Plant Health, Wageningen, The Netherlands.
¹⁸⁵ National Biodefense Analysis and Countermeasures Center, Fort Detrick, Frederick, MD, USA.
¹⁸⁶ School of Biological Sciences, University of Queensland, St. Lucia, Queensland, Australia.
¹⁸⁷ NHC Key Laboratory of Systems Biology of Pathogens and Christophe Mérieux Laboratory, IPB-Fondation Mérieux, Institute of Pathogen Biology, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China.
¹⁸⁸ Programme in Emerging Infectious Diseases, Duke-NUS Medical School, Singapore, Singapore.
¹⁸⁹ Fujian Province Key Laboratory of Plant Virology, Institute of Plant Virology, Fujian Agriculture and Forestry University, Fuzhou, Fujian, China.
¹⁹⁰ Mailman School of Public Health, Center for Infection and Immunity, Columbia University, New York, USA.
¹⁹¹ Department of Entomology and Plant Pathology, North Carolina State University, Raleigh, NC, USA.
¹⁹² MOH Key Laboratory of Systems Biology of Pathogens, IPB, CAMS, Beijing, China.
¹⁹³ Wuhan University School of Health Sciences, Wuhan, China.
¹⁹⁴ Departamento de Fitopatologia, Instituto de Biotecnologia Aplicada à Agropecuária, Universidade Federal de Viçosa, Viçosa, Minas Gerais, Brazil.
¹⁹⁵ National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Changping, Beijing, China.
¹⁹⁶ Shanghai Public Health Clinical Center, Institutes of Biomedical Sciences, Fudan University, Shanghai, China.

PMID: 32888050
PMCID: PMC7606449
DOI: 10.1007/s00705-020-04731-2

Abstract

In March 2020, following the annual International Committee on Taxonomy of Viruses (ICTV) ratification vote on newly proposed taxa, the phylum Negarnaviricota was amended and emended. At the genus rank, 20 new genera were added, two were deleted, one was moved, and three were renamed. At the species rank, 160 species were added, four were deleted, ten were moved and renamed, and 30 species were renamed. This article presents the updated taxonomy of Negarnaviricota as now accepted by the ICTV.

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Conflict of interest statement

Conflict of Interest

The authors declare no conflicts of interest.

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1. Afonso CL, Amarasinghe GK, Bányai K, Bào Y, Basler CF, Bavari S, Bejerman N, Blasdell KR, Briand F-X, Briese T, Bukreyev A, Calisher CH, Chandran K, Chéng J, Clawson AN, Collins PL, Dietzgen RG, Dolnik O, Domier LL, Dürrwald R, Dye JM, Easton AJ, Ebihara H, Farkas SL, Freitas-Astúa J, Formenty P, Fouchier RA, Fù Y, Ghedin E, Goodin MM, Hewson R, Horie M, Hyndman TH, Jiāng D, Kitajima EW, Kobinger GP, Kondo H, Kurath G, Lamb RA, Lenardon S, Leroy EM, Li C-X, Lin X-D, Liú L, Longdon B, Marton S, Maisner A, Mühlberger E, Netesov SV, Nowotny N, Patterson JL, Payne SL, Paweska JT, Randall RE, Rima BK, Rota P, Rubbenstroth D, Schwemmle M, Shi M, Smither SJ, Stenglein MD, Stone DM, Takada A, Terregino C, Tesh RB, Tian J-H, Tomonaga K, Tordo N, Towner JS, Vasilakis N, Verbeek M, Volchkov VE, Wahl-Jensen V, Walsh JA, Walker PJ, Wang D, Wang L-F, Wetzel T, Whitfield AE, Xiè JT, Yuen K-Y, Zhang Y-Z, Kuhn JH (2016) Taxonomy of the order Mononegavirales: update 2016. Arch Virol 161:2351–60 - PMC - PubMed
1. Aitken TH, Woodall JP, De Andrade AHP, Bensabath G, Shope RE (1975) Pacui virus, phlebotomine flies, and small mammals in Brazil: an epidemiological study. Am J Trop Med Hyg 24:358–68 - PubMed
1. Alkan C, Alwassouf S, Piorkowski G, Bichaud L, Tezcan S, Dincer E, Ergunay K, Ozbel Y, Alten B, de Lamballerie X, Charrel RN (2015) Isolation, genetic characterization, and seroprevalence of Adana virus, a novel phlebovirus belonging to the Salehabad virus complex, in Turkey. J Virol 89:4080–91 - PMC - PubMed
1. Alkan C, Erisoz Kasap O, Alten B, de Lamballerie X, Charrel RN (2016) Sandfly-Borne Phlebovirus Isolations from Turkey: New Insight into the Sandfly fever Sicilian and Sandfly fever Naples Species. PLoS Negl Trop Dis 10:e0004519. - PMC - PubMed

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[1] Abudurexiti A, Adkins S, Alioto D, Alkhovsky SV, Avšič-Županc T, Ballinger MJ, Bente DA, Beer M, Bergeron É, Blair CD, Briese T, Buchmeier MJ, Burt FJ, Calisher CH, Cháng C, Charrel RN, Choi IR, Clegg JCS, de la Torre JC, de Lamballerie X, Dèng F, Di Serio F, Digiaro M, Drebot MA, Duàn X, Ebihara H, Elbeaino T, Ergünay K, Fulhorst CF, Garrison AR, Gāo GF, Gonzalez J-PJ, Groschup MH, Günther S, Haenni AL, Hall RA, Hepojoki J, Hewson R, Hú Z, Hughes HR, Jonson MG, Junglen S, Klempa B, Klingström J, Kòu C, Laenen L, Lambert AJ, Langevin SA, Liu D, Lukashevich IS, Luò T, Lǚ C, Maes P, de Souza WM, Marklewitz M, Martelli GP, Matsuno K, Mielke-Ehret N, Minutolo M, Mirazimi A, Moming A, Mühlbach H-P, Naidu R, Navarro B, Nunes MRT, Palacios G, Papa A, Pauvolid-Corrêa A, Pawęska JT, Qiáo J, Radoshitzky SR, Resende RO, Romanowski V, Sall AA, Salvato MS, Sasaya T, Shěn S, Shí X, Shirako Y, Simmonds P, Sironi M, Song J-W, Spengler JR, Stenglein MD, Sū Z, Sūn S, Táng S, Turina M, Wáng B, Wáng C, Wáng H, Wáng J, Wèi T, Whitfield AE, Zerbini FM, Zhāng J, Zhāng L, Zhāng Y, Zhang Y-Z, Zhāng Y, Zhou X, Zhū L, Kuhn JH (2019) Taxonomy of the order Bunyavirales: update 2019. Arch Virol 164:1949–65 - PMC - PubMed

[2] Abudurexiti A, Adkins S, Alioto D, Alkhovsky SV, Avšič-Županc T, Ballinger MJ, Bente DA, Beer M, Bergeron É, Blair CD, Briese T, Buchmeier MJ, Burt FJ, Calisher CH, Cháng C, Charrel RN, Choi IR, Clegg JCS, de la Torre JC, de Lamballerie X, Dèng F, Di Serio F, Digiaro M, Drebot MA, Duàn X, Ebihara H, Elbeaino T, Ergünay K, Fulhorst CF, Garrison AR, Gāo GF, Gonzalez J-PJ, Groschup MH, Günther S, Haenni AL, Hall RA, Hepojoki J, Hewson R, Hú Z, Hughes HR, Jonson MG, Junglen S, Klempa B, Klingström J, Kòu C, Laenen L, Lambert AJ, Langevin SA, Liu D, Lukashevich IS, Luò T, Lǚ C, Maes P, de Souza WM, Marklewitz M, Martelli GP, Matsuno K, Mielke-Ehret N, Minutolo M, Mirazimi A, Moming A, Mühlbach H-P, Naidu R, Navarro B, Nunes MRT, Palacios G, Papa A, Pauvolid-Corrêa A, Pawęska JT, Qiáo J, Radoshitzky SR, Resende RO, Romanowski V, Sall AA, Salvato MS, Sasaya T, Shěn S, Shí X, Shirako Y, Simmonds P, Sironi M, Song J-W, Spengler JR, Stenglein MD, Sū Z, Sūn S, Táng S, Turina M, Wáng B, Wáng C, Wáng H, Wáng J, Wèi T, Whitfield AE, Zerbini FM, Zhāng J, Zhāng L, Zhāng Y, Zhang Y-Z, Zhāng Y, Zhou X, Zhū L, Kuhn JH (2019) Taxonomy of the order Bunyavirales: update 2019. Arch Virol 164:1949–65 - PMC - PubMed

[3] Afonso CL, Amarasinghe GK, Bányai K, Bào Y, Basler CF, Bavari S, Bejerman N, Blasdell KR, Briand F-X, Briese T, Bukreyev A, Calisher CH, Chandran K, Chéng J, Clawson AN, Collins PL, Dietzgen RG, Dolnik O, Domier LL, Dürrwald R, Dye JM, Easton AJ, Ebihara H, Farkas SL, Freitas-Astúa J, Formenty P, Fouchier RA, Fù Y, Ghedin E, Goodin MM, Hewson R, Horie M, Hyndman TH, Jiāng D, Kitajima EW, Kobinger GP, Kondo H, Kurath G, Lamb RA, Lenardon S, Leroy EM, Li C-X, Lin X-D, Liú L, Longdon B, Marton S, Maisner A, Mühlberger E, Netesov SV, Nowotny N, Patterson JL, Payne SL, Paweska JT, Randall RE, Rima BK, Rota P, Rubbenstroth D, Schwemmle M, Shi M, Smither SJ, Stenglein MD, Stone DM, Takada A, Terregino C, Tesh RB, Tian J-H, Tomonaga K, Tordo N, Towner JS, Vasilakis N, Verbeek M, Volchkov VE, Wahl-Jensen V, Walsh JA, Walker PJ, Wang D, Wang L-F, Wetzel T, Whitfield AE, Xiè JT, Yuen K-Y, Zhang Y-Z, Kuhn JH (2016) Taxonomy of the order Mononegavirales: update 2016. Arch Virol 161:2351–60 - PMC - PubMed

[4] Afonso CL, Amarasinghe GK, Bányai K, Bào Y, Basler CF, Bavari S, Bejerman N, Blasdell KR, Briand F-X, Briese T, Bukreyev A, Calisher CH, Chandran K, Chéng J, Clawson AN, Collins PL, Dietzgen RG, Dolnik O, Domier LL, Dürrwald R, Dye JM, Easton AJ, Ebihara H, Farkas SL, Freitas-Astúa J, Formenty P, Fouchier RA, Fù Y, Ghedin E, Goodin MM, Hewson R, Horie M, Hyndman TH, Jiāng D, Kitajima EW, Kobinger GP, Kondo H, Kurath G, Lamb RA, Lenardon S, Leroy EM, Li C-X, Lin X-D, Liú L, Longdon B, Marton S, Maisner A, Mühlberger E, Netesov SV, Nowotny N, Patterson JL, Payne SL, Paweska JT, Randall RE, Rima BK, Rota P, Rubbenstroth D, Schwemmle M, Shi M, Smither SJ, Stenglein MD, Stone DM, Takada A, Terregino C, Tesh RB, Tian J-H, Tomonaga K, Tordo N, Towner JS, Vasilakis N, Verbeek M, Volchkov VE, Wahl-Jensen V, Walsh JA, Walker PJ, Wang D, Wang L-F, Wetzel T, Whitfield AE, Xiè JT, Yuen K-Y, Zhang Y-Z, Kuhn JH (2016) Taxonomy of the order Mononegavirales: update 2016. Arch Virol 161:2351–60 - PMC - PubMed

[5] Aitken TH, Woodall JP, De Andrade AHP, Bensabath G, Shope RE (1975) Pacui virus, phlebotomine flies, and small mammals in Brazil: an epidemiological study. Am J Trop Med Hyg 24:358–68 - PubMed

[6] Aitken TH, Woodall JP, De Andrade AHP, Bensabath G, Shope RE (1975) Pacui virus, phlebotomine flies, and small mammals in Brazil: an epidemiological study. Am J Trop Med Hyg 24:358–68 - PubMed

[7] Alkan C, Alwassouf S, Piorkowski G, Bichaud L, Tezcan S, Dincer E, Ergunay K, Ozbel Y, Alten B, de Lamballerie X, Charrel RN (2015) Isolation, genetic characterization, and seroprevalence of Adana virus, a novel phlebovirus belonging to the Salehabad virus complex, in Turkey. J Virol 89:4080–91 - PMC - PubMed

[8] Alkan C, Alwassouf S, Piorkowski G, Bichaud L, Tezcan S, Dincer E, Ergunay K, Ozbel Y, Alten B, de Lamballerie X, Charrel RN (2015) Isolation, genetic characterization, and seroprevalence of Adana virus, a novel phlebovirus belonging to the Salehabad virus complex, in Turkey. J Virol 89:4080–91 - PMC - PubMed

[9] Alkan C, Erisoz Kasap O, Alten B, de Lamballerie X, Charrel RN (2016) Sandfly-Borne Phlebovirus Isolations from Turkey: New Insight into the Sandfly fever Sicilian and Sandfly fever Naples Species. PLoS Negl Trop Dis 10:e0004519. - PMC - PubMed

[10] Alkan C, Erisoz Kasap O, Alten B, de Lamballerie X, Charrel RN (2016) Sandfly-Borne Phlebovirus Isolations from Turkey: New Insight into the Sandfly fever Sicilian and Sandfly fever Naples Species. PLoS Negl Trop Dis 10:e0004519. - PMC - PubMed

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2020 taxonomic update for phylum Negarnaviricota (Riboviria: Orthornavirae), including the large orders Bunyavirales and Mononegavirales

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2020 taxonomic update for phylum Negarnaviricota (Riboviria: Orthornavirae), including the large orders Bunyavirales and Mononegavirales

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