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. 2019 Oct 1;29(19):126632.
doi: 10.1016/j.bmcl.2019.126632. Epub 2019 Aug 20.

GAC inhibitors with a 4-hydroxypiperidine spacer: Requirements for potency

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GAC inhibitors with a 4-hydroxypiperidine spacer: Requirements for potency

Lee McDermott et al. Bioorg Med Chem Lett. .

Abstract

Allosteric inhibitors of glutaminase (GAC), such as BPTES, CB-839 and UPGL00019, have great promise as inhibitors of cancer cell growth, but potent inhibitors with drug-like qualities have been difficult to achieve. Here, a small library of GAC inhibitors based on the UPGL00019 core is described. This set of derivatives was designed to assess if one or both of the phenylacetyl groups flanking the UPGL00019 core can be replaced by smaller simple aliphatic acyl groups without loss in potency. We found that one of the phenylacetyl moieties can be replaced by a set of small aliphatic moieties without loss in potency. We also found that enzymatic potency co-varies with the VDW volume or the maximum projection area of the groups used as replacements of the phenylacetyl moiety and used literature X-ray data to provide an explanation for this finding.

Keywords: BPTES; CB-839; GAC; Novel glutaminase inhibitors; UPGL00019; UPGL00019 derivatives.

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Figures

Figure 1.
Figure 1.
BPTES, CB-839 and 4-hydroxypiperidine-containing analogs UPGL00019 and UPGL00020
Figure 2.
Figure 2.
Overlay of 3UO9 (green) and 3VOZ (cyan) (A), 3UO9 and 5I94 (clay) (B) X-rays. Heat map of b-factors for BPTES and UPGL00019
Figure 3.
Figure 3.
Correlation of pIC50 with the cumulative values of VDW volume or MPA of the acyl-R1 and acyl-R2 groups of UPGL000019 and its derivatives.
Figure 4.
Figure 4.
Overlay of 5I94 (brown), 3VP2 (magenta), 3VP3 (blue), and 3VP4 (green) x-ray structures.
Scheme 1.
Scheme 1.
Synthesis of UPGL00019 derivatives. Reagents and conditions: a) NaH, CS2, MeI, THF, rt; b) NH2NH2 MeOH, rt; c) BrCN, Et3N, MeOH, rt; d) R1/R2-acyl chloride or R1/R2-acyl anhydride, Et3N, DMF, rt; e) R1/R2-acid HATU, Et3N, DMF, rt; f) 4N HCl in Dioxane, rt; g) 2-bromo-4-aminothiadiazole, K2CO3, DMSO, 50–55 °C or 2-bromo-4-aminothiadiazole, Et3N, EtOH, 80 °C.

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