Structural Basis of Sirtuin 6 Inhibition by the Hydroxamate Trichostatin A: Implications for Protein Deacylase Drug Development
- PMID: 30395713
- DOI: 10.1021/acs.jmedchem.8b01455
Structural Basis of Sirtuin 6 Inhibition by the Hydroxamate Trichostatin A: Implications for Protein Deacylase Drug Development
Abstract
Protein lysine deacylases comprise three zinc-dependent families and the NAD+-dependent sirtuins Sirt1-7, which contribute to aging-related diseases. Few Sirt6-specific inhibitors are available. Trichostatin A, which belongs to the potent, zinc-chelating hydroxamate inhibitors of zinc-dependent deacylases, was recently found to potently and isoform-specifically inhibit Sirt6. We solved a crystal structure of a Sirt6/ADP-ribose/trichostatin A complex, which reveals nicotinamide pocket and acyl channel as binding site and provides interaction details supporting the development of improved deacylase inhibitors.
Similar articles
-
Trichostatin A inhibits deacetylation of histone H3 and p53 by SIRT6.Arch Biochem Biophys. 2018 Jan 15;638:8-17. doi: 10.1016/j.abb.2017.12.009. Epub 2017 Dec 9. Arch Biochem Biophys. 2018. PMID: 29233643 Free PMC article.
-
Mechanism-Based Inhibitors of the Human Sirtuin 5 Deacylase: Structure-Activity Relationship, Biostructural, and Kinetic Insight.Angew Chem Int Ed Engl. 2017 Nov 20;56(47):14836-14841. doi: 10.1002/anie.201709050. Epub 2017 Nov 2. Angew Chem Int Ed Engl. 2017. PMID: 29044784 Free PMC article.
-
Elucidating the Unconventional Binding Mode of a DNA-Encoded Library Hit Provides a Blueprint for Sirtuin 6 Inhibitor Development.ChemMedChem. 2024 Oct 16;19(20):e202400273. doi: 10.1002/cmdc.202400273. Epub 2024 Aug 19. ChemMedChem. 2024. PMID: 38940296 Free PMC article.
-
Sirtuin activators and inhibitors: Promises, achievements, and challenges.Pharmacol Ther. 2018 Aug;188:140-154. doi: 10.1016/j.pharmthera.2018.03.004. Epub 2018 Mar 22. Pharmacol Ther. 2018. PMID: 29577959 Free PMC article. Review.
-
Inhibitors of NAD+ dependent histone deacetylases (sirtuins).Curr Pharm Des. 2008;14(6):562-73. doi: 10.2174/138161208783885380. Curr Pharm Des. 2008. PMID: 18336301 Review.
Cited by
-
A secreted sirtuin from Campylobacter jejuni contributes to neutrophil activation and intestinal inflammation during infection.Sci Adv. 2023 Aug 11;9(32):eade2693. doi: 10.1126/sciadv.ade2693. Epub 2023 Aug 11. Sci Adv. 2023. PMID: 37566649 Free PMC article.
-
Cryo-EM structure of the human Sirtuin 6-nucleosome complex.Sci Adv. 2023 Apr 14;9(15):eadf7586. doi: 10.1126/sciadv.adf7586. Epub 2023 Apr 14. Sci Adv. 2023. PMID: 37058572 Free PMC article.
-
Cryo-EM structure of the human Sirtuin 6-nucleosome complex.bioRxiv [Preprint]. 2023 Mar 18:2023.03.17.533206. doi: 10.1101/2023.03.17.533206. bioRxiv. 2023. Update in: Sci Adv. 2023 Apr 14;9(15):eadf7586. doi: 10.1126/sciadv.adf7586 PMID: 36993468 Free PMC article. Updated. Preprint.
-
Structural Basis for Activation of Human Sirtuin 6 by Fluvastatin.ACS Med Chem Lett. 2020 Sep 24;11(11):2285-2289. doi: 10.1021/acsmedchemlett.0c00407. eCollection 2020 Nov 12. ACS Med Chem Lett. 2020. PMID: 33214841 Free PMC article.
-
Structural basis for the activation and inhibition of Sirtuin 6 by quercetin and its derivatives.Sci Rep. 2019 Dec 16;9(1):19176. doi: 10.1038/s41598-019-55654-1. Sci Rep. 2019. PMID: 31844103 Free PMC article.
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources
Chemical Information
Molecular Biology Databases