Multivalent binding of PWWP2A to H2A.Z regulates mitosis and neural crest differentiation
- PMID: 28645917
- PMCID: PMC5538766
- DOI: 10.15252/embj.201695757
Multivalent binding of PWWP2A to H2A.Z regulates mitosis and neural crest differentiation
Abstract
Replacement of canonical histones with specialized histone variants promotes altering of chromatin structure and function. The essential histone variant H2A.Z affects various DNA-based processes via poorly understood mechanisms. Here, we determine the comprehensive interactome of H2A.Z and identify PWWP2A as a novel H2A.Z-nucleosome binder. PWWP2A is a functionally uncharacterized, vertebrate-specific protein that binds very tightly to chromatin through a concerted multivalent binding mode. Two internal protein regions mediate H2A.Z-specificity and nucleosome interaction, whereas the PWWP domain exhibits direct DNA binding. Genome-wide mapping reveals that PWWP2A binds selectively to H2A.Z-containing nucleosomes with strong preference for promoters of highly transcribed genes. In human cells, its depletion affects gene expression and impairs proliferation via a mitotic delay. While PWWP2A does not influence H2A.Z occupancy, the C-terminal tail of H2A.Z is one important mediator to recruit PWWP2A to chromatin. Knockdown of PWWP2A in Xenopus results in severe cranial facial defects, arising from neural crest cell differentiation and migration problems. Thus, PWWP2A is a novel H2A.Z-specific multivalent chromatin binder providing a surprising link between H2A.Z, chromosome segregation, and organ development.
Keywords: H2A.Z; PWWP2A; chromatin; mitosis; neural crest.
© 2017 The Authors.
Figures
Comment in
-
PWWP2A: A novel mitosis link?Cell Cycle. 2017 Oct 18;16(20):1849-1850. doi: 10.1080/15384101.2017.1372523. Epub 2017 Sep 21. Cell Cycle. 2017. PMID: 28933988 Free PMC article. No abstract available.
Similar articles
-
The H2A.Z and NuRD associated protein HMG20A controls early head and heart developmental transcription programs.Nat Commun. 2023 Jan 28;14(1):472. doi: 10.1038/s41467-023-36114-x. Nat Commun. 2023. PMID: 36709316 Free PMC article.
-
PWWP2A binds distinct chromatin moieties and interacts with an MTA1-specific core NuRD complex.Nat Commun. 2018 Oct 16;9(1):4300. doi: 10.1038/s41467-018-06665-5. Nat Commun. 2018. PMID: 30327463 Free PMC article.
-
The histone variant H2A.Z is an important regulator of enhancer activity.Nucleic Acids Res. 2015 Nov 16;43(20):9742-56. doi: 10.1093/nar/gkv825. Epub 2015 Aug 28. Nucleic Acids Res. 2015. PMID: 26319018 Free PMC article.
-
Patterning chromatin: form and function for H2A.Z variant nucleosomes.Curr Opin Genet Dev. 2006 Apr;16(2):119-24. doi: 10.1016/j.gde.2006.02.005. Epub 2006 Feb 28. Curr Opin Genet Dev. 2006. PMID: 16503125 Review.
-
Regulation of gene expression and cellular proliferation by histone H2A.Z.Biochem Cell Biol. 2009 Feb;87(1):179-88. doi: 10.1139/O08-138. Biochem Cell Biol. 2009. PMID: 19234533 Review.
Cited by
-
The H2A.Z and NuRD associated protein HMG20A controls early head and heart developmental transcription programs.Nat Commun. 2023 Jan 28;14(1):472. doi: 10.1038/s41467-023-36114-x. Nat Commun. 2023. PMID: 36709316 Free PMC article.
-
JASPer controls interphase histone H3S10 phosphorylation by chromosomal kinase JIL-1 in Drosophila.Nat Commun. 2019 Nov 25;10(1):5343. doi: 10.1038/s41467-019-13174-6. Nat Commun. 2019. PMID: 31767855 Free PMC article.
-
Spatial organization of transcribed eukaryotic genes.Nat Cell Biol. 2022 Mar;24(3):327-339. doi: 10.1038/s41556-022-00847-6. Epub 2022 Feb 17. Nat Cell Biol. 2022. PMID: 35177821 Free PMC article.
-
A de novo SFMBT1 pathogenic variant identified in a boy with Poland syndrome.Cold Spring Harb Mol Case Stud. 2022 Apr 28;8(3):a006168. doi: 10.1101/mcs.a006168. Print 2022 Apr. Cold Spring Harb Mol Case Stud. 2022. PMID: 35483874 Free PMC article.
-
The Role of the Histone Variant H2A.Z in Metazoan Development.J Dev Biol. 2022 Jul 1;10(3):28. doi: 10.3390/jdb10030028. J Dev Biol. 2022. PMID: 35893123 Free PMC article. Review.
References
-
- Auckland P, McAinsh AD (2015) Building an integrated model of chromosome congression. J Cell Sci 128: 3363–3374 - PubMed
-
- Bellmeyer A, Krase J, Lindgren J, LaBonne C (2003) The protooncogene c‐myc is an essential regulator of neural crest formation in xenopus. Dev Cell 4: 827–839 - PubMed
-
- Bonisch C, Schneider K, Punzeler S, Wiedemann SM, Bielmeier C, Bocola M, Eberl HC, Kuegel W, Neumann J, Kremmer E, Leonhardt H, Mann M, Michaelis J, Schermelleh L, Hake SB (2012) H2A.Z.2.2 is an alternatively spliced histone H2A.Z variant that causes severe nucleosome destabilization. Nucleic Acids Res 40: 5951–5964 - PMC - PubMed
Publication types
MeSH terms
Substances
Grants and funding
LinkOut - more resources
Full Text Sources
Other Literature Sources
Molecular Biology Databases