The effect of coccidial vaccine challenge (CVC, Coccivac(®)B; challenged, CHA; or unchallenged, NCH) on ileal endogenous amino acid (IEAA) losses and standardized ileal AA digestibility (SIAAD) in 21- and 42-day-old broilers fed a corn-soybean meal-dried distillers' grains with solubles-poultry by-product meal-based diet (Expt. 1) and the effect of supplemental AA in ameliorating the effect of CVC (Expt. 2) were evaluated. Expt. 1 was designed as a 2 (d 21 or 42) x 2 (NCH or CHA) factorial arrangement of treatments with 8 replicates in a complete randomized design. The CVC birds were gavaged with 12 x coccidial vaccine on d 15 and 36 and were sampled on 6 d post challenge. SIAAD was determined by correcting apparent ileal AA digestibility for IEAA losses. Feed intake (FI) and BW gain were higher (P ≤ 0.05) in 21-day-old NCH birds compared to the 21-day-old CHA birds while 42-day-old birds had higher FI and BW gain than 21-day-old NCH and CHA birds. Ileal endogenous nitrogen loss was higher (P ≤ 0.05) in 42-day-old CHA birds compared to 42-day-old NCH birds. Apparent ileal AA digestibility in 21-day-old CHA birds was lower (P ≤ 0.05) than for 21-day-old NCH and 42-day-old NCH and CHA birds. SIAAD in 21-day-old CHA birds was lower (indispensable AA = 15.2 and dispensable AA = 17.8%-unit; P ≤ 0.05) than for 21-day-old NCH and 42-day-old NCH and CHA birds. Apparent ileal digestibility and total tract utilization of DM, N, and energy were not different between d 21 NCH and d 42 NCH and CHA birds but higher (P ≤ 0.05) than for d 21 CHA birds. Supplemental AA restored feed efficiency, but not BW gain, to that of the positive control (0.715 vs. 0.737). Results from Expt.1 showed that CVC significantly influenced ileal AA digestibility in 21- but not in 42-day-old birds. Expt. 2 showed that consideration of SIAAD in feed formulation may benefit feed efficiency.