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. 2014 Dec 5:5:5671.
doi: 10.1038/ncomms6671.

miR-205 acts as a tumour radiosensitizer by targeting ZEB1 and Ubc13

Affiliations

miR-205 acts as a tumour radiosensitizer by targeting ZEB1 and Ubc13

Peijing Zhang et al. Nat Commun. .

Abstract

Tumour cells associated with therapy resistance (radioresistance and drug resistance) are likely to give rise to local recurrence and distant metastatic relapse. Recent studies revealed microRNA (miRNA)-mediated regulation of metastasis and epithelial-mesenchymal transition; however, whether specific miRNAs regulate tumour radioresistance and can be exploited as radiosensitizing agents remains unclear. Here we find that miR-205 promotes radiosensitivity and is downregulated in radioresistant subpopulations of breast cancer cells, and that loss of miR-205 is highly associated with poor distant relapse-free survival in breast cancer patients. Notably, therapeutic delivery of miR-205 mimics via nanoliposomes can sensitize the tumour to radiation in a xenograft model. Mechanistically, radiation suppresses miR-205 expression through ataxia telangiectasia mutated (ATM) and zinc finger E-box binding homeobox 1 (ZEB1). Moreover, miR-205 inhibits DNA damage repair by targeting ZEB1 and the ubiquitin-conjugating enzyme Ubc13. These findings identify miR-205 as a radiosensitizing miRNA and reveal a new therapeutic strategy for radioresistant tumours.

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Figures

Figure 1
Figure 1. miR-205 increases radiosensitivity and is downregulated in radioresistant breast cancer cells
(a) Top: schematic representation of the generation of a radioresistant subline (SUM159-P2) from the parental SUM159 cells (SUM159-P0). Bottom: miRNA expression profiling of SUM159-P2 cells relative to SUM159-P0 cells using a qPCR-based miRNA array. The expression values are shown in Supplementary Table 1. (b) TaqMan qPCR analysis of miR-205 in SUM159-P0 and SUM159-P2 cells. n = 3 samples per group. (c) qPCR of miR-205 (top) and clonogenic survival assays (bottom) of mesenchymal-like and epithelial-like breast cancer cell lines. n = 3 samples per group. (d) Clonogenic survival assays of SUM159-P2 cells transduced with miR-205. n = 3 wells per group. (e) Clonogenic survival assays of SUM159-P0 cells transfected with the miR-205 inhibitor. n = 3 wells per group. Inset in d and e: immunoblotting of ZEB1 and GAPDH. Data in b, c, d and e are the mean of biological replicates from a representative experiment, and error bars indicate s.e.m. Statistical significance was determined by a two-tailed, unpaired Student's t-test. The experiments were repeated 3 times.
Figure 2
Figure 2. Therapeutic effect of miR-205 mimics in mice
(a) Kaplan-Meier curves showing the distant relapse-free survival of patients with high (n = 43) or low (n = 38) expression of miR-205 in their breast tumors. The P value was determined by a log-rank test. (b) Clonogenic survival assays of SUM159-P2 cells incubated with 100 nM DOPC-encapsulated miR-205 mimics. n = 3 wells per group. (c) Top: overview of the experimental scheme. Bottom: tumor size of mice bearing SUM159-P2 xenografts. Mice were treated with the vehicle or DOPC-encapsulated miR-205 mimics or scramble mimics. Tumors were locally irradiated with a 15-Gy single dose (RT). n = 5 mice per group. General linear model multivariate analysis was performed to determine statistical significance. (d) qPCR of miR-205 in tumor tissues from the mice described in c. n = 5 mice per group. (e) Immunoblotting of ZEB1 and GAPDH in tumor lysates. Data in b, c and d are the mean of biological replicates from a representative experiment, and error bars indicate s.e.m. Statistical significance in b and d was determined by a two-tailed, unpaired Student's t-test. The experiments were repeated 3 times.
Figure 3
Figure 3. miR-205 regulates DNA damage repair and radiosensitivity through ZEB1 and Ubc13
(a) γH2AX and DAPI staining of SUM159-P2 cells transfected with miR-205 or scramble control oligonucleotides, 24 hours after 6-Gy IR. Scale bar: 20 μm. (b) HR repair assays of U2OS_DR-GFP cells transfected with miR-205 alone or in combination with ZEB1. n = 3 wells per group. (c) Immunoblotting of ZEB1, Ubc13, BRCA1 and GAPDH in SUM159-P0 cells transfected with miR-205 mimics or the miR-205 inhibitor. (d) Luciferase activity of the wild-type (UTR-WT) or mutant (UTR-mut.) Ubc13 3′ UTR reporter gene in 293T cells transfected with the miR-205-expressing or empty vector. n = 3 wells per group. (e) Immunoblotting of K63-linked polyubiquitin chains, Ubc13 and GAPDH in SUM159-P0 and SUM159-P2 cells. (f) Clonogenic survival assays of SUM159-P2 cells transfected with Ubc13 siRNA. n = 3 wells per group. (g) Top: clonogenic survival assays of miR-205-transduced SUM159-P2 cells with or without ectopic expression of ZEB1 and Ubc13. Bottom: immunoblotting of ZEB1, Ubc13 and GAPDH. n = 3 wells per group. (h) HR repair assays of U2OS_DR-GFP cells transfected with miR-205 alone or in combination with ZEB1 or Ubc13, or both. n = 3 wells per group. Data in b, d, f, g and h are the mean of biological replicates from a representative experiment, and error bars indicate s.e.m. Statistical significance was determined by a two-tailed, unpaired Student's t-test. The experiments were repeated 3 times.
Figure 4
Figure 4. Radiation downregulates miR-205 expression through ZEB1 and ATM
(a) Immunoblotting of ZEB1 and GAPDH (top) and qPCR of miR-205 (bottom) in SUM159-P2 cells transduced with ZEB1 shRNA. n = 3 samples per group. (b) Immunoblotting of Zeb1 and Gapdh (top) and qPCR of miR-205 (bottom) in Zeb1+/+, Zeb1+/− and Zeb1−/- MEFs. n = 3 samples per group. (c) Human mir-205 genomic locus. The three short blue lines represent PCR amplicons specific for three E-box elements. (d) Top: 293T cells were transfected with SFB-GFP or SFB-ZEB1, immunoprecipitated with the FLAG antibody and immunoblotted with the FLAG antibody. Bottom: ChIP assays of 293T cells transfected with SFB-GFP or SFB-ZEB1. PCR was performed with primers specific for E-box elements 1, 2 and 3. (e) Activity of a luciferase reporter fused to the putative human mir-205 promoter in 293T cells transfected with SFB-GFP or SFB-ZEB1. n = 3 wells per group. (f) qPCR of miR-205 and miR-200c in irradiated SUM159-P0 cells with or without pretreatment with the ATM inhibitor Ku55933 (10 μM, 1 hour). n = 3 samples per group. (g) qPCR of miR-205 in SUM159-P0 cells transfected with ZEB1 siRNA or scramble control oligonucleotides. Cells were treated with 6-Gy IR. n = 3 samples per group. Data in a, b, e, f and g are the mean of biological replicates from a representative experiment, and error bars indicate s.e.m. Statistical significance was determined by a two-tailed, unpaired Student's t-test. The experiments were repeated 3 times.
Figure 5
Figure 5
The working model of regulation of radiosensitivity and DNA damage repair by miR-205.

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