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Review
. 2014 Winter;13(4):607-23.
doi: 10.1187/cbe.13-10-0193.

A survey of scholarly literature describing the field of bioinformatics education and bioinformatics educational research

Alejandra J Magana  1 , Manaz Taleyarkhan  2 , Daniela Rivera Alvarado  2 , Michael Kane  2 , John Springer  2 , Kari Clase  3
Affiliations
Review

A survey of scholarly literature describing the field of bioinformatics education and bioinformatics educational research

Alejandra J Magana et al. CBE Life Sci Educ. 2014 Winter.

Abstract

Bioinformatics education can be broadly defined as the teaching and learning of the use of computer and information technology, along with mathematical and statistical analysis for gathering, storing, analyzing, interpreting, and integrating data to solve biological problems. The recent surge of genomics, proteomics, and structural biology in the potential advancement of research and development in complex biomedical systems has created a need for an educated workforce in bioinformatics. However, effectively integrating bioinformatics education through formal and informal educational settings has been a challenge due in part to its cross-disciplinary nature. In this article, we seek to provide an overview of the state of bioinformatics education. This article identifies: 1) current approaches of bioinformatics education at the undergraduate and graduate levels; 2) the most common concepts and skills being taught in bioinformatics education; 3) pedagogical approaches and methods of delivery for conveying bioinformatics concepts and skills; and 4) assessment results on the impact of these programs, approaches, and methods in students' attitudes or learning. Based on these findings, it is our goal to describe the landscape of scholarly work in this area and, as a result, identify opportunities and challenges in bioinformatics education.

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Figures

Figure 1.
Figure 1.
Distribution of articles published in the years 1998 through 2013.
Figure 2.
Figure 2.
Distribution of manuscripts by type of publication and category.
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References

    1. Adams R, Forin T, Srinivasan S, Mann L. Proceedings of the 9th International Conference of the Learning Sciences. Chicago IL: 2010. Cross-disciplinary practice in engineering contexts: a developmental phenomenographical perspective; pp. 1158–1165.
    1. Andersson S, Brodin E, Hindbeck H, Höög J, Langerth-Zetterman M, Strömdahl H. Theory-anchored evaluation applied to a CSCL intense course in Bioinformatics. 2001. Paper presented at the European Conference on Computer-Supported Collaborative Learning, Maastricht, Netherlands, March 22-24.
    1. Bagga PS. Development of an undergraduate bioinformatics degree program at a liberal arts college. Yale J Biol Med. 2012;85:309–321. - PMC - PubMed
    1. Beck J, Buckner B, Nikolova O. Using interdisciplinary bioinformatics undergraduate research to recruit and retain computer science students. 2007. pp. 7–10. Paper presented at the 38th SIGCSE Technical Symposium on Computer Science Education, Covington, Kentucky.
    1. Bednarski A, Elgin S, Pakrasi H. An inquiry into protein structure and genetic disease: introducing undergraduates to bioinformatics in a large introductory course. Cell Biol Educ. 2005;4:207–220. - PMC - PubMed

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