Biomolecular halogen bonds
- PMID: 25326832
- DOI: 10.1007/128_2014_551
Biomolecular halogen bonds
Abstract
Halogens are atypical elements in biology, but are common as substituents in ligands, including thyroid hormones and inhibitors, which bind specifically to proteins and nucleic acids. The short-range, stabilizing interactions of halogens - now seen as relatively common in biology - conform generally to halogen bonds characterized in small molecule systems and as described by the σ-hole model. The unique properties of biomolecular halogen bonds (BXBs), particularly in their geometric and energetic relationship to classic hydrogen bonds, make them potentially powerful tools for inhibitor design and molecular engineering. This chapter reviews the current research on BXBs, focusing on experimental studies on their structure-energy relationships, how these studies inform the development of computational methods to model BXBs, and considers how BXBs can be applied to the rational design of more effective inhibitors against therapeutic targets and of new biological-based materials.
Similar articles
-
Halogen bonding for rational drug design and new drug discovery.Expert Opin Drug Discov. 2012 May;7(5):375-83. doi: 10.1517/17460441.2012.678829. Epub 2012 Mar 30. Expert Opin Drug Discov. 2012. PMID: 22462734 Review.
-
Nonbonding interactions of organic halogens in biological systems: implications for drug discovery and biomolecular design.Phys Chem Chem Phys. 2010 May 14;12(18):4543-51. doi: 10.1039/b926326h. Epub 2010 Mar 25. Phys Chem Chem Phys. 2010. PMID: 20428531
-
Relationships between hydrogen bonds and halogen bonds in biological systems.Acta Crystallogr B Struct Sci Cryst Eng Mater. 2017 Apr 1;73(Pt 2):255-264. doi: 10.1107/S2052520617003109. Epub 2017 Mar 29. Acta Crystallogr B Struct Sci Cryst Eng Mater. 2017. PMID: 28362290 Review.
-
Enthalpy-entropy compensation in biomolecular halogen bonds measured in DNA junctions.Biochemistry. 2013 Jul 23;52(29):4891-903. doi: 10.1021/bi400590h. Epub 2013 Jul 9. Biochemistry. 2013. PMID: 23789744
-
A Biological Take on Halogen Bonding and Other Non-Classical Non-Covalent Interactions.Chem Rec. 2021 May;21(5):1240-1251. doi: 10.1002/tcr.202100076. Epub 2021 Apr 22. Chem Rec. 2021. PMID: 33886153 Review.
Cited by
-
In Vitro and In Silico Antiviral Activity of Di-Halogenated Compounds Derived from L-Tyrosine against Human Immunodeficiency Virus 1 (HIV-1).Curr Issues Mol Biol. 2023 Oct 9;45(10):8173-8200. doi: 10.3390/cimb45100516. Curr Issues Mol Biol. 2023. PMID: 37886959 Free PMC article.
-
Halogen Bond-Involving Self-Assembly of Iodonium Carboxylates: Adding a Dimension to Supramolecular Architecture.Int J Mol Sci. 2023 Sep 27;24(19):14642. doi: 10.3390/ijms241914642. Int J Mol Sci. 2023. PMID: 37834088 Free PMC article.
-
(2-Hydroxy-3-Methoxybenzylidene)thiazolo[3,2-a]pyrimidines: Synthesis, Self-Assembly in the Crystalline Phase and Cytotoxic Activity.Int J Mol Sci. 2023 Jan 20;24(3):2084. doi: 10.3390/ijms24032084. Int J Mol Sci. 2023. PMID: 36768407 Free PMC article.
-
Pushing the Limits of Characterising a Weak Halogen Bond in Solution.Chemistry. 2022 Jan 24;28(5):e202103559. doi: 10.1002/chem.202103559. Epub 2021 Dec 13. Chemistry. 2022. PMID: 34807488 Free PMC article.
-
Halogen bonding in the co-crystallization of potentially ditopic diiodotetrafluorobenzene: a powerful tool for constructing multicomponent supramolecular assemblies.Natl Sci Rev. 2020 Aug 7;7(12):1906-1932. doi: 10.1093/nsr/nwaa170. eCollection 2020 Dec. Natl Sci Rev. 2020. PMID: 34691532 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources