Mapping of helicase and helicase substrate-binding domains on simian virus 40 large T antigen
- PMID: 2157869
- PMCID: PMC249356
- DOI: 10.1128/JVI.64.5.2014-2020.1990
Mapping of helicase and helicase substrate-binding domains on simian virus 40 large T antigen
Abstract
We generated fragments of simian virus 40 large tumor antigen (T antigen) by tryptic digestion and assayed them for helicase activity and helicase substrate (mostly single-stranded DNA)-binding activity in order to map the domain sites on the protein. The N-terminal 130 amino acids were not required for either activity, since a 76-kilodalton (kDa) fragment (amino acids 131 to 708) was just as active as intact T antigen. To map the helicase domain further, smaller tryptic fragments were generated. A 66-kDa fragment (131 to about 616) retained some activity, whereas a slightly smaller 62-kDa fragment (137 or 155 to 616) had none. This suggests that the minimal helicase domain maps from residue 131 to approximately residue 616. To map the helicase substrate-binding domain, we tested various fragments in a substrate-binding assay. The smallest fragment for which we could clearly demonstrate activity was a 46-kDa fragment (131 to 517). To determine the relationship between the helicase substrate domain and the origin-binding domain (131 to 257, minimal core region; 131 to 371, optimal region), we performed binding experiments with competitor DNAs present. We found that origin-containing double-stranded DNA was an excellent competitor of the binding of the helicase substrate to T antigen, suggesting that the two domains overlap. Therefore, full helicase activity requires at least a partial origin-binding domain as well as an active ATPase domain. Additionally, we found that the helicase substrate was a poor competitor of origin-binding activity, indicating that T antigen has a much higher affinity to origin sequences than to the helicase substrate.
Similar articles
-
Nonspecific DNA binding activity of simian virus 40 large T antigen: evidence for the cooperation of two regions for full activity.J Virol. 1992 Sep;66(9):5443-52. doi: 10.1128/JVI.66.9.5443-5452.1992. J Virol. 1992. PMID: 1323705 Free PMC article.
-
Identification of simian virus 40 T-antigen residues important for specific and nonspecific binding to DNA and for helicase activity.J Virol. 1990 Oct;64(10):4858-65. doi: 10.1128/JVI.64.10.4858-4865.1990. J Virol. 1990. PMID: 2168972 Free PMC article.
-
The unwinding of duplex regions in DNA by the simian virus 40 large tumor antigen-associated DNA helicase activity.J Biol Chem. 1988 Jan 5;263(1):383-92. J Biol Chem. 1988. PMID: 2826443
-
Effects of in vitro dephosphorylation on DNA-binding and DNA helicase activities of simian virus 40 large tumor antigen.J Virol. 1988 Apr;62(4):1258-65. doi: 10.1128/JVI.62.4.1258-1265.1988. J Virol. 1988. PMID: 2831386 Free PMC article.
-
Quantitative analysis of the binding of simian virus 40 large T antigen to DNA.J Virol. 2007 Sep;81(17):9162-74. doi: 10.1128/JVI.00384-07. Epub 2007 Jun 27. J Virol. 2007. PMID: 17596312 Free PMC article.
Cited by
-
Role of single-stranded DNA binding activity of T antigen in simian virus 40 DNA replication.J Virol. 2001 Mar;75(6):2839-47. doi: 10.1128/JVI.75.6.2839-2847.2001. J Virol. 2001. PMID: 11222709 Free PMC article.
-
The 68-kilodalton E1 protein of bovine papillomavirus is a DNA binding phosphoprotein which associates with the E2 transcriptional activator in vitro.J Virol. 1991 Feb;65(2):649-56. doi: 10.1128/JVI.65.2.649-656.1991. J Virol. 1991. PMID: 1846189 Free PMC article.
-
Biochemical analysis of mutants with changes in the origin-binding domain of simian virus 40 tumor antigen.J Virol. 1993 Jul;67(7):4227-36. doi: 10.1128/JVI.67.7.4227-4236.1993. J Virol. 1993. PMID: 8389924 Free PMC article.
-
The N-terminal side of the origin-binding domain of simian virus 40 large T antigen is involved in A/T untwisting.J Virol. 1997 Nov;71(11):8743-9. doi: 10.1128/JVI.71.11.8743-8749.1997. J Virol. 1997. PMID: 9343233 Free PMC article.
-
The origin DNA-binding and single-stranded DNA-binding domains of simian virus 40 large T antigen are distinct.J Virol. 1998 Dec;72(12):10256-9. doi: 10.1128/JVI.72.12.10256-10259.1998. J Virol. 1998. PMID: 9811771 Free PMC article.
References
Publication types
MeSH terms
Substances
Grants and funding
LinkOut - more resources
Full Text Sources
Other Literature Sources