doi: 10.1007/s00705-008-0200-0.
Epub 2008 Sep 25.
Complete nucleotide sequence analysis of a Dengue-1 virus isolated on Easter Island, Chile
Affiliations
- PMID: 18815724
- DOI: 10.1007/s00705-008-0200-0
Item in Clipboard
Complete nucleotide sequence analysis of a Dengue-1 virus isolated on Easter Island, Chile
Arch Virol.
2008.
Abstract
Dengue-1 viruses responsible for the dengue fever outbreak in Easter Island in 2002 were isolated from acute-phase sera of dengue fever patients. In order to analyze the complete genome sequence, we designed primers to amplify contiguous segments across the entire sequence of the viral genome. RT-PCR products obtained were cloned, and complete nucleotide and deduced amino acid sequences were determined. This report constitutes the first complete genetic characterization of a DENV-1 isolate from Chile. Phylogenetic analysis shows that an Easter Island isolate is most closely related to Pacific DENV-1 genotype IV viruses.
Similar articles
-
Complete genome sequence analysis of dengue virus type 2 isolated in Brunei.Virus Res. 2008 Jul;135(1):48-52. doi: 10.1016/j.virusres.2008.02.006. Epub 2008 Apr 11. Virus Res. 2008. PMID: 18406488
-
Continued persistence of a single genotype of dengue virus type-3 (DENV-3) in Delhi, India since its re-emergence over the last decade.J Microbiol Immunol Infect. 2010 Feb;43(1):53-61. doi: 10.1016/S1684-1182(10)60008-4. Epub 2010 Mar 29. J Microbiol Immunol Infect. 2010. PMID: 20434124
-
Phylogenetic analysis of the NS5 gene of dengue viruses isolated in Ecuador.Virus Res. 2008 Mar;132(1-2):197-200. doi: 10.1016/j.virusres.2007.10.012. Epub 2007 Dec 11. Virus Res. 2008. PMID: 18063164
-
A real-time PCR procedure for detection of dengue virus serotypes 1, 2, and 3, and their quantitation in clinical and laboratory samples.J Virol Methods. 2010 Jan;163(1):1-9. doi: 10.1016/j.jviromet.2009.10.001. Epub 2009 Oct 12. J Virol Methods. 2010. PMID: 19822173 Review.
-
Molecular characterization of an imported dengue virus serotype 4 isolate from Thailand.Arch Virol. 2018 Oct;163(10):2903-2906. doi: 10.1007/s00705-018-3906-7. Epub 2018 Jun 14. Arch Virol. 2018. PMID: 29948381 Review.
Cited by
-
Comparison of full-length genomics sequences between dengue virus serotype 3, parental strain, and its derivatives, and B-cell epitopes prediction from envelope region.Bioinformation. 2013 Jul 12;9(12):622-8. doi: 10.6026/97320630009622. Print 2013. Bioinformation. 2013. PMID: 23904739 Free PMC article.
-
Displacement of the predominant dengue virus from type 2 to type 1 with a subsequent genotype shift from IV to I in Surabaya, Indonesia 2008-2010.PLoS One. 2011;6(11):e27322. doi: 10.1371/journal.pone.0027322. Epub 2011 Nov 7. PLoS One. 2011. PMID: 22087290 Free PMC article.
-
Spatiotemporal dynamics and epistatic interaction sites in dengue virus type 1: a comprehensive sequence-based analysis.PLoS One. 2013 Sep 9;8(9):e74165. doi: 10.1371/journal.pone.0074165. eCollection 2013. PLoS One. 2013. PMID: 24040199 Free PMC article.
-
Worldwide spread of Dengue virus type 1.PLoS One. 2013 May 13;8(5):e62649. doi: 10.1371/journal.pone.0062649. Print 2013. PLoS One. 2013. PMID: 23675416 Free PMC article.
MeSH terms
Substances
Associated data
- Actions
- Actions
- Actions
- Actions
- Actions
LinkOut - more resources
Full Text Sources
Medical
Molecular Biology Databases
