Structural insights on the translation initiation complex: ghosts of a universal initiation complex
- PMID: 17238926
- DOI: 10.1111/j.1365-2958.2006.05574.x
Structural insights on the translation initiation complex: ghosts of a universal initiation complex
Abstract
All living organisms utilize ribosomes to translate messenger RNA into proteins. Initiation of translation, the process of bringing together mRNA, initiator transfer RNA, and the ribosome, is therefore of critical importance to all living things. Two protein factors, IF1 (a/eIF1A) and IF2 (a/eIF5B), are conserved among all three kingdoms of life and have been called universal initiation factors (Roll-Mecak et al., 2001). Recent X-ray, NMR and cryo-EM structures of the universal factors, alone and in complex with eubacterial ribosomes, point to the structural homology among the initiation factors and initiation complexes. Taken together with genomic and functional evidence, the structural studies allow us to predict some features of eukaryotic and archaeal initiation complexes. Although initiation of translation in eukaryotes and archaea requires more initiation factors than in eubacteria we propose the existence of a common denominator initiation complex with structural and functional homology across all kingdoms of life.
Similar articles
-
Structure of the 30S translation initiation complex.Nature. 2008 Sep 18;455(7211):416-20. doi: 10.1038/nature07192. Epub 2008 Aug 31. Nature. 2008. PMID: 18758445
-
Structure-function insights into prokaryotic and eukaryotic translation initiation.Curr Opin Struct Biol. 2009 Jun;19(3):300-9. doi: 10.1016/j.sbi.2009.04.010. Epub 2009 Jun 1. Curr Opin Struct Biol. 2009. PMID: 19493673 Review.
-
Macromolecular mimicry in translation initiation: a model for the initiation factor IF2 on the ribosome.IUBMB Life. 2000 Dec;50(6):347-54. doi: 10.1080/713803743. IUBMB Life. 2000. PMID: 11327306 Review.
-
Remarkable conservation of translation initiation factors: IF1/eIF1A and IF2/eIF5B are universally distributed phylogenetic markers.IUBMB Life. 2001 May;51(5):321-7. doi: 10.1080/152165401317190842. IUBMB Life. 2001. PMID: 11699879
-
Conformational transition of initiation factor 2 from the GTP- to GDP-bound state visualized on the ribosome.Nat Struct Mol Biol. 2005 Dec;12(12):1145-9. doi: 10.1038/nsmb1012. Epub 2005 Nov 13. Nat Struct Mol Biol. 2005. PMID: 16284619
Cited by
-
Yeast 18 S rRNA is directly involved in the ribosomal response to stringent AUG selection during translation initiation.J Biol Chem. 2010 Oct 15;285(42):32200-12. doi: 10.1074/jbc.M110.146662. Epub 2010 Aug 10. J Biol Chem. 2010. PMID: 20699223 Free PMC article.
-
The universally conserved prokaryotic GTPases.Microbiol Mol Biol Rev. 2011 Sep;75(3):507-42, second and third pages of table of contents. doi: 10.1128/MMBR.00009-11. Microbiol Mol Biol Rev. 2011. PMID: 21885683 Free PMC article. Review.
-
A single mammalian mitochondrial translation initiation factor functionally replaces two bacterial factors.Mol Cell. 2008 Feb 1;29(2):180-90. doi: 10.1016/j.molcel.2007.11.021. Mol Cell. 2008. PMID: 18243113 Free PMC article.
-
Shuttle vector expression in Thermococcus kodakaraensis: contributions of cis elements to protein synthesis in a hyperthermophilic archaeon.Appl Environ Microbiol. 2008 May;74(10):3099-104. doi: 10.1128/AEM.00305-08. Epub 2008 Mar 31. Appl Environ Microbiol. 2008. PMID: 18378640 Free PMC article.
-
Evolutionary and genetic analyses of mitochondrial translation initiation factors identify the missing mitochondrial IF3 in S. cerevisiae.Nucleic Acids Res. 2012 Jul;40(13):6122-34. doi: 10.1093/nar/gks272. Epub 2012 Mar 28. Nucleic Acids Res. 2012. PMID: 22457064 Free PMC article.
Publication types
MeSH terms
Substances
Grants and funding
LinkOut - more resources
Full Text Sources