A conserved mediator hinge revealed in the structure of the MED7.MED21 (Med7.Srb7) heterodimer
- PMID: 15710619
- DOI: 10.1074/jbc.M413466200
A conserved mediator hinge revealed in the structure of the MED7.MED21 (Med7.Srb7) heterodimer
Abstract
The Mediator of transcriptional regulation is the central coactivator that enables a response of RNA polymerase II (Pol II) to activators and repressors. We present the 3.0-A crystal structure of a highly conserved part of the Mediator, the MED7.MED21 (Med7.Srb7) heterodimer. The structure is very extended, spanning one-third of the Mediator length and almost the diameter of Pol II. It shows a four-helix bundle domain and a coiled-coil protrusion connected by a flexible hinge. Four putative protein binding sites on the surface allow for assembly of the Mediator middle module and for binding of the conserved subunit MED6, which is shown to bridge to the Mediator head module. A flexible MED6 bridge and the MED7.MED21 hinge could account for changes in overall Mediator structure upon binding to Pol II or activators. Our results support the idea that transcription regulation involves conformational changes within the general machinery.
Similar articles
-
Role for the MED21-MED7 Hinge in Assembly of the Mediator-RNA Polymerase II Holoenzyme.J Biol Chem. 2016 Dec 23;291(52):26886-26898. doi: 10.1074/jbc.M116.756098. Epub 2016 Nov 7. J Biol Chem. 2016. PMID: 27821593 Free PMC article.
-
Functional and physical interactions within the middle domain of the yeast mediator.Mol Genet Genomics. 2006 Aug;276(2):197-210. doi: 10.1007/s00438-006-0135-7. Epub 2006 Jun 7. Mol Genet Genomics. 2006. PMID: 16758199
-
Mediator head subcomplex Med11/22 contains a common helix bundle building block with a specific function in transcription initiation complex stabilization.Nucleic Acids Res. 2011 Aug;39(14):6291-304. doi: 10.1093/nar/gkr229. Epub 2011 Apr 15. Nucleic Acids Res. 2011. PMID: 21498544 Free PMC article.
-
Model of the Mediator middle module based on protein cross-linking.Nucleic Acids Res. 2013 Nov;41(20):9266-73. doi: 10.1093/nar/gkt704. Epub 2013 Aug 11. Nucleic Acids Res. 2013. PMID: 23939621 Free PMC article.
-
Mediator of transcriptional regulation.Trends Biochem Sci. 1996 Sep;21(9):335-7. doi: 10.1016/s0968-0004(96)10051-7. Trends Biochem Sci. 1996. PMID: 8870496 Review.
Cited by
-
Role of Mediator in regulating Pol II elongation and nucleosome displacement in Saccharomyces cerevisiae.Genetics. 2012 May;191(1):95-106. doi: 10.1534/genetics.111.135806. Epub 2012 Feb 29. Genetics. 2012. PMID: 22377631 Free PMC article.
-
Role for the MED21-MED7 Hinge in Assembly of the Mediator-RNA Polymerase II Holoenzyme.J Biol Chem. 2016 Dec 23;291(52):26886-26898. doi: 10.1074/jbc.M116.756098. Epub 2016 Nov 7. J Biol Chem. 2016. PMID: 27821593 Free PMC article.
-
The metazoan Mediator co-activator complex as an integrative hub for transcriptional regulation.Nat Rev Genet. 2010 Nov;11(11):761-72. doi: 10.1038/nrg2901. Epub 2010 Oct 13. Nat Rev Genet. 2010. PMID: 20940737 Free PMC article. Review.
-
Mediator structure and rearrangements required for holoenzyme formation.Nature. 2017 Apr 13;544(7649):196-201. doi: 10.1038/nature21393. Epub 2017 Mar 1. Nature. 2017. PMID: 28241144 Free PMC article.
-
Mediator recruitment to heat shock genes requires dual Hsf1 activation domains and mediator tail subunits Med15 and Med16.J Biol Chem. 2013 Apr 26;288(17):12197-213. doi: 10.1074/jbc.M112.449553. Epub 2013 Feb 27. J Biol Chem. 2013. PMID: 23447536 Free PMC article.
Publication types
MeSH terms
Substances
Associated data
- Actions
- Actions
LinkOut - more resources
Full Text Sources
Molecular Biology Databases