Thermodynamics of 7-methylguanosine cation stacking with tryptophan upon mRNA 5' cap binding to translation factor eIF4E
- PMID: 14565465
- DOI: 10.1081/NCN-120023033
Thermodynamics of 7-methylguanosine cation stacking with tryptophan upon mRNA 5' cap binding to translation factor eIF4E
Abstract
All eukaryotic nuclear transcribed mRNAs possess the cap structure, consisting of 7-methylguanosine linked by the 5'-5' triphosphate bridge to the first nucleoside. The goal of the present study is to dissect the enthalpy and entropy changes of association of the mRNA 5' cap with eIF4E into contributions originating from the interaction of 7-methylguanosine with tryptophan. The model results are discussed in the context of the thermodynamic parameters for the association of eIF4E with synthetic cap analogues.
Similar articles
-
Thermodynamics of mRNA 5' cap binding by eukaryotic translation initiation factor eIF4E.Biochemistry. 2004 Oct 26;43(42):13305-17. doi: 10.1021/bi0491651. Biochemistry. 2004. PMID: 15491137
-
Thermodynamic analysis of mRNA cap binding by the human initiation factor eIF4E via free energy perturbations.J Am Chem Soc. 2009 Dec 23;131(50):18139-46. doi: 10.1021/ja9064359. J Am Chem Soc. 2009. PMID: 19924990
-
Biophysical studies of eIF4E cap-binding protein: recognition of mRNA 5' cap structure and synthetic fragments of eIF4G and 4E-BP1 proteins.J Mol Biol. 2002 Jun 7;319(3):615-35. doi: 10.1016/S0022-2836(02)00328-5. J Mol Biol. 2002. PMID: 12054859
-
Crystallographic and mass spectrometric characterisation of eIF4E with N7-alkylated cap derivatives.J Mol Biol. 2007 Sep 7;372(1):7-15. doi: 10.1016/j.jmb.2007.06.033. Epub 2007 Jun 15. J Mol Biol. 2007. PMID: 17631896 Review.
-
eIF4E, the mRNA cap-binding protein: from basic discovery to translational research.Biochem Cell Biol. 2008 Apr;86(2):178-83. doi: 10.1139/O08-034. Biochem Cell Biol. 2008. PMID: 18443631 Review.
Cited by
-
Enzymatic synthesis of RNAs capped with nucleotide analogues reveals the molecular basis for substrate selectivity of RNA capping enzyme: impacts on RNA metabolism.PLoS One. 2013 Sep 25;8(9):e75310. doi: 10.1371/journal.pone.0075310. eCollection 2013. PLoS One. 2013. PMID: 24086504 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Miscellaneous