Linking the fields--the interplay of organic synthesis, biophysical chemistry, and cell biology in the chemical biology of protein lipidation
- PMID: 11828408
- DOI: 10.1002/1439-7633(20001002)1:3<144::AID-CBIC144>3.0.CO;2-D
Linking the fields--the interplay of organic synthesis, biophysical chemistry, and cell biology in the chemical biology of protein lipidation
Abstract
Research in the biological sciences has undergone a fundamental and dramatic change during the last decades. Whereas biology was more phenomenologically oriented for a long time, today many biological processes are investigated and understood in molecular detail. It has become evident that all biological phenomena have a chemical basis: Biology is based on chemical principles. In the past, this insight had led to the development of biochemistry, molecular biology, and modern pharmacology. Today it increasingly determines the manner in which various biological phenomena are studied. The tools provided by classical biological techniques often are not sufficient to address the prevailing issues in precise molecular detail. Instead, the strengths of both chemical and biological methodology have to be used. Several recent research projects have proven that combining the power of organic synthesis with cell biology may open up entirely new and alternative opportunities for the study of biological problems. In this review we summarize the successful interplay between three disciplines-organic synthesis, biophysics, and cell biology-in the study of protein lipidation and its relevance to targeting of proteins to the plasma membrane of cells in precise molecular detail. This interplay is highlighted by using the Ras protein as a representative example. The development of methods for the synthesis of Ras-derived peptides and fully functional Ras proteins, the determination of their biophysical properties, in particular the ability to bind to model membranes, and finally the use of synthetic Ras peptides and Ras proteins in cell biological experiments are addressed. The successful combination of these three disciplines has led to a better understanding of the factors governing the selective targeting of Ras and related lipid-modified proteins to the plasma membrane.
Similar articles
-
The chemical biology of Ras lipidation.Biol Chem. 2001 Aug;382(8):1133-45. doi: 10.1515/BC.2001.143. Biol Chem. 2001. PMID: 11592394 Review.
-
Bridging the gap between cell biology and organic chemistry: chemical synthesis and biological application of lipidated peptides and proteins.Naturwissenschaften. 2002 Sep;89(9):381-90. doi: 10.1007/s00114-002-0354-7. Epub 2002 Aug 24. Naturwissenschaften. 2002. PMID: 12435088 Review.
-
Membrane binding of lipidated Ras peptides and proteins--the structural point of view.Biochim Biophys Acta. 2009 Jan;1788(1):273-88. doi: 10.1016/j.bbamem.2008.08.006. Epub 2008 Aug 15. Biochim Biophys Acta. 2009. PMID: 18771652 Review.
-
Bioorthogonal chemistry: applications in activity-based protein profiling.Acc Chem Res. 2011 Sep 20;44(9):718-29. doi: 10.1021/ar200125k. Epub 2011 Jul 28. Acc Chem Res. 2011. PMID: 21797256
-
Peptide conjugates as tools for the study of biological signal transduction.Bioorg Med Chem. 1999 Feb;7(2):193-224. doi: 10.1016/s0968-0896(98)00204-1. Bioorg Med Chem. 1999. PMID: 10218812 Review.
Cited by
-
Amphiphilic Iodine(III) Reagents for the Lipophilization of Peptides in Water.Angew Chem Int Ed Engl. 2021 Aug 9;60(33):17963-17968. doi: 10.1002/anie.202106458. Epub 2021 Jul 12. Angew Chem Int Ed Engl. 2021. PMID: 34038604 Free PMC article.
-
H-ras protein in a bilayer: interaction and structure perturbation.J Am Chem Soc. 2007 Oct 10;129(40):12280-6. doi: 10.1021/ja073949v. Epub 2007 Sep 19. J Am Chem Soc. 2007. PMID: 17880077 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Miscellaneous