A definition of the domains Archaea, Bacteria and Eucarya in terms of small subunit ribosomal RNA characteristics
- PMID: 11540071
- DOI: 10.1016/S0723-2020(11)80303-6
A definition of the domains Archaea, Bacteria and Eucarya in terms of small subunit ribosomal RNA characteristics
Abstract
The number of small subunit rRNA sequences is now great enough that the three domains Archaea, Bacteria and Eucarya (Woese et al., 1990) can be reliably defined in terms of their sequence "signatures". Approximately 50 homologous positions (or nucleotide pairs) in the small subunit rRNA characterize and distinguish among the three. In addition, the three can be recognized by a variety of nonhomologous rRNA characters, either individual positions and/or higher-order structural features. The Crenarchaeota and the Euryarchaeota, the two archaeal kingdoms, can also be defined and distinguished by their characteristic compositions at approximately fifteen positions in the small subunit rRNA molecule.
Similar articles
-
A phylogenetic analysis of Aquifex pyrophilus.Syst Appl Microbiol. 1992 Aug;15(3):352-6. doi: 10.1016/S0723-2020(11)80207-9. Syst Appl Microbiol. 1992. PMID: 11540077
-
Phylogenetic placement of the Spirosomaceae.Syst Appl Microbiol. 1990 Mar;13(1):19-23. doi: 10.1016/S0723-2020(11)80175-X. Syst Appl Microbiol. 1990. PMID: 11538307
-
A detailed phylogeny for the Methanomicrobiales.Syst Appl Microbiol. 1992 Aug;15(3):363-71. doi: 10.1016/S0723-2020(11)80209-2. Syst Appl Microbiol. 1992. PMID: 11540078
-
Archaebacteria: their phylogenetic relationship with the eubacterial and eukaryotic kingdoms.Microbiologia. 1988 Feb;4(1):5-27. Microbiologia. 1988. PMID: 2481476 Review.
-
Who is out there? Microbial aspects of biodiversity.Syst Appl Microbiol. 2000 Apr;23(1):1-8. doi: 10.1016/S0723-2020(00)80039-9. Syst Appl Microbiol. 2000. PMID: 10879972 Review. No abstract available.
Cited by
-
Preliminary characterization of biosurfactant produced by a PAH-degrading Paenibacillus sp. under thermophilic conditions.Environ Sci Pollut Res Int. 2016 Jul;23(14):14221-30. doi: 10.1007/s11356-016-6526-3. Epub 2016 Apr 7. Environ Sci Pollut Res Int. 2016. PMID: 27053051
-
Archaea in coastal marine environments.Proc Natl Acad Sci U S A. 1992 Jun 15;89(12):5685-9. doi: 10.1073/pnas.89.12.5685. Proc Natl Acad Sci U S A. 1992. PMID: 1608980 Free PMC article.
-
Caldicoprobacter algeriensis sp. nov. a new thermophilic anaerobic, xylanolytic bacterium isolated from an Algerian hot spring.Curr Microbiol. 2011 Mar;62(3):826-32. doi: 10.1007/s00284-010-9789-9. Epub 2010 Oct 28. Curr Microbiol. 2011. PMID: 20981546
-
Remarkable archaeal diversity detected in a Yellowstone National Park hot spring environment.Proc Natl Acad Sci U S A. 1994 Mar 1;91(5):1609-13. doi: 10.1073/pnas.91.5.1609. Proc Natl Acad Sci U S A. 1994. PMID: 7510403 Free PMC article.
-
Functional role of ribosomal signatures.Biophys J. 2010 Dec 15;99(12):3930-40. doi: 10.1016/j.bpj.2010.09.062. Biophys J. 2010. PMID: 21156135 Free PMC article.
Publication types
MeSH terms
Substances
Grants and funding
LinkOut - more resources
Full Text Sources